C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: contactin associated protein-like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000174469 CNTNAP2 9606 + 7:146116361-148420998 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000361727 CNTNAP2-001 146116361-148420998 protein_coding
  ENST00000455301 CNTNAP2-002 147638809-147977989 protein_coding
  ENST00000463592 CNTNAP2-003 148339472-148420998 processed_transcript
  ENST00000602734 CNTNAP2-004 148339472-148416684 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000361727ENST00000455301ENST00000463592ENST00000602734
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000361727 N/A N/A 0.021±0.00 7.693±3.37 0.026±0.00 0.064±0.00 0.092±0.06 N/A 0.089±0.00 N/A 0.039±0.00 0.407±0.11 N/A 0.109±0.04
ENST00000455301 N/A N/A N/A N/A N/A N/A 0.589±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000463592 0.016±0.00 0.473±0.00 N/A N/A N/A 0.175±0.05 N/A 0.451±0.40 0.110±0.00 0.054±0.00 0.009±0.00 2.013±0.95 0.802±0.34 0.616±0.00
ENST00000602734 N/A N/A 0.137±0.00 N/A 0.110±0.00 N/A N/A N/A N/A 0.030±0.00 N/A N/A 0.237±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XR CIL_0004XR_0001 CGP 7:144451941-148420998

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005769 IDA early endosome
GO:0005794 IDA Golgi apparatus
GO:0007155 IEA cell adhesion
GO:0007420 TAS brain development
GO:0007612 IMP learning
GO:0008038 NAS neuron recognition
GO:0008076 IDA voltage-gated potassium channel complex
GO:0009986 IDA cell surface
GO:0016020 IDA membrane
GO:0016021 NAS integral component of membrane
GO:0019226 NAS transmission of nerve impulse
GO:0019899 IPI enzyme binding
GO:0021756 IEP striatum development
GO:0021761 IEP limbic system development
GO:0021794 IEP thalamus development
GO:0021987 IEP cerebral cortex development
GO:0030424 ISS axon
GO:0030425 ISS dendrite
GO:0030534 IMP adult behavior
GO:0030673 IDA axolemma
GO:0031175 ISS neuron projection development
GO:0034613 ISS cellular protein localization
GO:0035176 IMP social behavior
GO:0043025 ISS neuronal cell body
GO:0043204 ISS perikaryon
GO:0044224 ISS juxtaparanode region of axon
GO:0045163 ISS clustering of voltage-gated potassium channels
GO:0071109 IEP superior temporal gyrus development
GO:0071205 ISS protein localization to juxtaparanode region of axon
GO:0071625 IMP vocalization behavior

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058969 cntnap2a contactin associated protein-like 2a protein_coding Danio_rerio
ENSDARG00000074351 CNTNAP2 (2 of 4) contactin associated protein-like 2 protein_coding Danio_rerio
ENSDARG00000074558 cntnap2b contactin associated protein-like 2b protein_coding Danio_rerio
ENSMUSG00000039419 Cntnap2 contactin associated protein-like 2 protein_coding Mus_musculus

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