C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: contactin associated protein-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000361727 CNTNAP2-001 ENSG00000174469 9606 + 7:146116361-148420998 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverMuscleOvaryTestisENST00000361727
Transcript ID Bladder Brain Breast Colon Heart Liver Muscle Ovary Testis
ENST00000361727 0.021±0.00 7.693±3.37 0.026±0.00 0.064±0.00 0.092±0.06 0.089±0.00 0.039±0.00 0.407±0.11 0.109±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XR CIL_0004XR_0001 CGP 7:144451941-148420998

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005769 IDA early endosome
GO:0005794 IDA Golgi apparatus
GO:0007155 IEA cell adhesion
GO:0007420 TAS brain development
GO:0007612 IMP learning
GO:0008038 NAS neuron recognition
GO:0008076 IDA voltage-gated potassium channel complex
GO:0009986 IDA cell surface
GO:0016020 IDA membrane
GO:0016021 NAS integral component of membrane
GO:0019226 NAS transmission of nerve impulse
GO:0019899 IPI enzyme binding
GO:0021756 IEP striatum development
GO:0021761 IEP limbic system development
GO:0021794 IEP thalamus development
GO:0021987 IEP cerebral cortex development
GO:0030424 ISS axon
GO:0030425 ISS dendrite
GO:0030534 IMP adult behavior
GO:0030673 IDA axolemma
GO:0031175 ISS neuron projection development
GO:0034613 ISS cellular protein localization
GO:0035176 IMP social behavior
GO:0043025 ISS neuronal cell body
GO:0043204 ISS perikaryon
GO:0044224 ISS juxtaparanode region of axon
GO:0045163 ISS clustering of voltage-gated potassium channels
GO:0071109 IEP superior temporal gyrus development
GO:0071205 ISS protein localization to juxtaparanode region of axon
GO:0071625 IMP vocalization behavior

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114641 Cntnap2-001 protein_coding Mus_musculus 0 5262
ENSMUST00000060839 Cntnap2-002 protein_coding Mus_musculus 0 1123
ENSMUST00000150737 Cntnap2-003 processed_transcript Mus_musculus 0 351

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