C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: apoptosis-inducing, TAF9-like domain 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175279 APITD1 9606 + 1:10430443-10442809 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309048 APITD1-001 10430443-10442809 protein_coding
  ENST00000462462 APITD1-003 10431123-10442502 processed_transcript
  ENST00000464507 APITD1-004 10440123-10442657 retained_intron
  ENST00000477755 APITD1-002 10430783-10442334 protein_coding
  ENST00000602486 APITD1-005 10430512-10431130 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309048ENST00000462462ENST00000464507ENST00000477755ENST00000602486
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309048 0.842±0.00 N/A 1.119±0.00 1.601±1.03 1.041±0.00 0.735±0.20 0.867±0.00 N/A 1.306±0.89 1.011±0.49 0.302±0.00 5.024±3.73 2.619±1.40 40.069±20.66
ENST00000462462 N/A 2.392±0.00 N/A N/A N/A N/A 0.861±0.71 5.826±0.00 N/A 1.766±0.00 N/A 16.205±13.79 13.052±0.00 80.092±61.45
ENST00000464507 N/A N/A N/A 0.965±0.00 0.831±0.00 N/A N/A 0.833±0.00 N/A N/A N/A N/A N/A N/A
ENST00000477755 2.531±0.00 2.468±0.00 0.835±0.00 3.844±0.00 1.900±0.59 2.144±0.00 0.845±0.00 1.099±0.00 0.806±0.64 2.589±0.00 0.646±0.42 10.343±6.98 3.850±1.36 49.031±28.42
ENST00000602486 N/A N/A N/A N/A N/A 1.904±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IM CIL_0008IM_0001 VISTA 1:10233066-10834152
CIL_0007WE CIL_0007WE_0001 VISTA 1:10372013-10973061
CIL_00085P CIL_00085P_0001 VISTA 1:10397607-10998574
CIL_00082Y CIL_00082Y_0001 VISTA 1:10421182-11021687

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000712 IMP resolution of meiotic recombination intermediates
GO:0000776 IEA kinetochore
GO:0003677 IDA DNA binding
GO:0003682 IDA chromatin binding
GO:0003690 IDA double-stranded DNA binding
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0006281 IDA DNA repair
GO:0006352 IEA DNA-templated transcription, initiation
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0007067 IEA mitotic nuclear division
GO:0031297 IMP replication fork processing
GO:0031398 TAS positive regulation of protein ubiquitination
GO:0043240 IDA Fanconi anaemia nuclear complex
GO:0046982 IEA protein heterodimerization activity
GO:0071821 IDA FANCM-MHF complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070485 apitd1 apoptosis-inducing, TAF9-like domain 1 protein_coding Danio_rerio
ENSMUSG00000073705 Apitd1 apoptosis-inducing, TAF9-like domain 1 protein_coding Mus_musculus

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