C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: apoptosis-inducing, TAF9-like domain 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000073705 Apitd1 10090 - 4:149127121-149137629 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030813 Apitd1-001 149128198-149137629 protein_coding
  ENSMUST00000105695 Apitd1-003 149131355-149137577 protein_coding
  ENSMUST00000105696 Apitd1-005 149127121-149137548 nonsense_mediated_decay
  ENSMUST00000132672 Apitd1-004 149128547-149130456 retained_intron
  ENSMUST00000150150 Apitd1-002 149128833-149132635 protein_coding
  ENSMUST00000176124 Apitd1-006 149128776-149137565 protein_coding
  ENSMUST00000177408 Apitd1-007 149128540-149137569 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030813ENSMUST00000105695ENSMUST00000105696ENSMUST00000132672ENSMUST00000150150ENSMUST00000176124ENSMUST00000177408
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030813 0.887±0.36 0.162±0.03 1.294±0.41 5.066±1.44 0.516±0.18 0.452±0.27 0.400±0.21 0.298±0.17 5.725±4.18 0.493±0.11 0.329±0.16 2.124±0.85 4.124±2.45 3.120±1.13
ENSMUST00000105695 0.897±0.00 1.588±0.40 N/A N/A 0.560±0.22 0.652±0.11 N/A N/A 0.454±0.00 0.240±0.00 0.269±0.00 1.060±0.28 0.396±0.00 2.001±0.01
ENSMUST00000105696 0.326±0.00 0.473±0.00 N/A N/A 0.504±0.00 0.492±0.04 0.132±0.00 N/A N/A 0.161±0.00 N/A N/A N/A N/A
ENSMUST00000132672 0.659±0.00 0.391±0.15 0.495±0.00 N/A 0.446±0.00 0.375±0.04 0.137±0.00 0.268±0.00 0.141±0.00 0.391±0.00 0.383±0.00 1.148±0.37 N/A 4.246±0.00
ENSMUST00000150150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.423±0.00 N/A N/A
ENSMUST00000176124 N/A 0.232±0.00 N/A 1.869±0.00 0.772±0.00 0.652±0.00 N/A N/A N/A N/A 0.205±0.11 1.099±0.36 6.513±1.13 2.714±0.00
ENSMUST00000177408 N/A 0.876±0.18 0.689±0.00 2.211±0.00 0.979±0.31 1.136±0.68 0.135±0.01 0.579±0.31 2.167±1.83 0.443±0.06 0.315±0.02 1.534±0.82 2.255±1.45 2.634±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008S2 CIL_0008S2_0002 VISTA 4:148555953-149160332
CIL_00082Y CIL_00082Y_0002 VISTA 4:148576108-149176659
CIL_00085P CIL_00085P_0002 VISTA 4:148597228-149198219
CIL_0007WE CIL_0007WE_0002 VISTA 4:148621504-149222572
CIL_0008IM CIL_0008IM_0002 VISTA 4:148744049-149345133

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000712 ISS resolution of meiotic recombination intermediates
GO:0000776 IEA kinetochore
GO:0003677 ISS DNA binding
GO:0003682 ISS chromatin binding
GO:0003690 ISS double-stranded DNA binding
GO:0005515 IEA protein binding
GO:0006281 ISS DNA repair
GO:0006974 ISS cellular response to DNA damage stimulus
GO:0007067 IEA mitotic nuclear division
GO:0031297 ISS replication fork processing
GO:0043240 ISS Fanconi anaemia nuclear complex
GO:0046982 IEA protein heterodimerization activity
GO:0071821 ISS FANCM-MHF complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070485 apitd1 apoptosis-inducing, TAF9-like domain 1 protein_coding Danio_rerio
ENSG00000175279 APITD1 apoptosis-inducing, TAF9-like domain 1 protein_coding Homo_sapiens

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