C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apoptosis-inducing, TAF9-like domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477755 APITD1-002 ENSG00000175279 9606 + 1:10430783-10442334 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000477755
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000477755 2.531±0.00 2.468±0.00 0.835±0.00 3.844±0.00 1.900±0.59 2.144±0.00 0.845±0.00 1.099±0.00 0.806±0.64 2.589±0.00 0.646±0.42 10.343±6.98 3.850±1.36 49.031±28.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IM CIL_0008IM_0001 VISTA 1:10233066-10834152
CIL_0007WE CIL_0007WE_0001 VISTA 1:10372013-10973061
CIL_00085P CIL_00085P_0001 VISTA 1:10397607-10998574
CIL_00082Y CIL_00082Y_0001 VISTA 1:10421182-11021687

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006352 IEA DNA-templated transcription, initiation
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176124 Apitd1-006 protein_coding Mus_musculus 0 287
ENSMUST00000030813 Apitd1-001 protein_coding Mus_musculus 0 287
ENSMUST00000177408 Apitd1-007 protein_coding Mus_musculus 0 196
ENSMUST00000150150 Apitd1-002 protein_coding Mus_musculus 0 195
ENSMUST00000105696 Apitd1-005 nonsense_mediated_decay Mus_musculus 3e-37 159
ENSMUST00000105695 Apitd1-003 protein_coding Mus_musculus 4e-36 156

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