C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LON peptidase N-terminal domain and ring finger 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175556 LONRF3 9606 + X:118974614-119018355 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304778 LONRF3-201 118974614-119018355 protein_coding
  ENST00000371628 LONRF3-005 118974750-119017929 protein_coding
  ENST00000422289 LONRF3-202 118976332-119018355 protein_coding
  ENST00000439603 LONRF3-002 118975362-119017987 protein_coding
  ENST00000472173 LONRF3-004 118976332-119017983 processed_transcript
  ENST00000481285 LONRF3-003 118974618-119017983 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304778ENST00000371628ENST00000422289ENST00000439603ENST00000481285
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304778 N/A 0.131±0.00 0.106±0.00 N/A 0.636±0.00 N/A 0.093±0.03 0.467±0.00 0.796±0.00 0.940±0.00 N/A 0.179±0.10 0.073±0.03 0.161±0.00
ENST00000371628 0.249±0.00 N/A N/A N/A N/A 0.992±0.00 0.228±0.00 0.411±0.00 1.741±0.00 1.734±0.01 1.568±0.00 0.306±0.13 0.157±0.00 0.577±0.45
ENST00000422289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.044±0.00 N/A
ENST00000439603 N/A 0.286±0.00 N/A 0.381±0.05 N/A 0.543±0.00 N/A 0.415±0.00 N/A N/A N/A 0.336±0.08 0.111±0.00 N/A
ENST00000481285 0.154±0.00 N/A N/A N/A N/A 0.572±0.00 N/A 0.867±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071C CIL_00071C_0001 CGP X:118823790-119018355

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004176 IEA ATP-dependent peptidase activity
GO:0005515 IPI:IEA protein binding
GO:0006200 IEA ATP catabolic process
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000016239 Lonrf3 LON peptidase N-terminal domain and ring finger 3 protein_coding Mus_musculus

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