C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LON peptidase N-terminal domain and ring finger 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000016239 Lonrf3 10090 + X:36328353-36362341 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000016383 Lonrf3-001 36328353-36362341 protein_coding
  ENSMUST00000126147 Lonrf3-002 36329216-36341754 protein_coding
  ENSMUST00000135758 Lonrf3-003 36328353-36342611 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000016383ENSMUST00000126147ENSMUST00000135758
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000016383 0.355±0.16 1.139±0.62 1.436±0.00 0.241±0.06 1.272±0.30 0.102±0.02 1.057±0.24 0.761±0.34 1.117±0.32 0.211±0.15 1.332±0.69 8.162±4.18 3.489±0.48
ENSMUST00000126147 N/A N/A N/A 0.184±0.00 N/A 0.060±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135758 0.203±0.00 2.431±1.06 N/A 0.284±0.14 0.805±0.47 N/A 0.347±0.04 0.119±0.00 0.287±0.05 N/A 1.285±0.55 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071C CIL_00071C_0002 CGP X:36195904-36362341

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004176 IEA ATP-dependent peptidase activity
GO:0005575 ND cellular_component
GO:0006200 IEA ATP catabolic process
GO:0006508 IEA proteolysis
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000175556 LONRF3 LON peptidase N-terminal domain and ring finger 3 protein_coding Homo_sapiens

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