C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LON peptidase N-terminal domain and ring finger 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371628 LONRF3-005 ENSG00000175556 9606 + X:118974750-119017929 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371628
Transcript ID Adipose Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371628 0.249±0.00 0.992±0.00 0.228±0.00 0.411±0.00 1.741±0.00 1.734±0.01 1.568±0.00 0.306±0.13 0.157±0.00 0.577±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071C CIL_00071C_0001 CGP X:118823790-119018355

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004176 IEA ATP-dependent peptidase activity
GO:0005515 IPI:IEA protein binding
GO:0006200 IEA ATP catabolic process
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000016383 Lonrf3-001 protein_coding Mus_musculus 0 2113
ENSMUST00000135758 Lonrf3-003 retained_intron Mus_musculus 0 894
ENSMUST00000126147 Lonrf3-002 protein_coding Mus_musculus 0 503

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