C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 35, member A4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000176087 SLC35A4 9606 + 5:140564456-140569103 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000323146 SLC35A4-001 140564456-140569103 protein_coding
  ENST00000508770 SLC35A4-002 140564565-140567300 processed_transcript
  ENST00000514137 SLC35A4-003 140565746-140567229 retained_intron
  ENST00000514199 SLC35A4-004 140564891-140569100 protein_coding
  ENST00000612662 SLC35A4-201 140564835-140569098 protein_coding
  ENST00000623481 SLC35A4-006 140564456-140567117 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000612662
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000612662 36.843±0.00 50.575±0.00 18.065±0.00 55.700±0.00 23.266±0.00 35.716±0.00 51.540±0.00 28.416±0.00 30.048±0.00 29.668±19.64 83.099±21.43 54.898±14.85 50.659±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZN CIL_0006ZN_0001 CGP 5:140547666-140593752
CIL_0006ZI CIL_0006ZI_0001 CGP 5:140558268-140593752

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0005351 IEA sugar:proton symporter activity
GO:0008643 IEA carbohydrate transport
GO:0015992 IEA proton transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062379 slc35a4 solute carrier family 35, member A4 protein_coding Danio_rerio
ENSMUSG00000033272 Slc35a4 solute carrier family 35, member A4 protein_coding Mus_musculus
ENSMUSG00000095078 Gm5866 predicted gene 5866 protein_coding Mus_musculus

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