C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 35, member A4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612662 SLC35A4-201 ENSG00000176087 9606 + 5:140564835-140569098 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000612662
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000612662 36.843±0.00 50.575±0.00 18.065±0.00 55.700±0.00 23.266±0.00 35.716±0.00 51.540±0.00 28.416±0.00 30.048±0.00 29.668±19.64 83.099±21.43 54.898±14.85 50.659±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZN CIL_0006ZN_0001 CGP 5:140547666-140593752
CIL_0006ZI CIL_0006ZI_0001 CGP 5:140558268-140593752

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0005351 IEA sugar:proton symporter activity
GO:0008643 IEA carbohydrate transport
GO:0015992 IEA proton transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000186538 Slc35a4-201 protein_coding Mus_musculus 0 1415
ENSMUST00000036158 Slc35a4-001 protein_coding Mus_musculus 0 1415
ENSMUST00000050476 Slc35a4-002 protein_coding Mus_musculus 0 1085
ENSMUST00000177881 Gm5866-201 protein_coding Mus_musculus 0 691
ENSMUST00000185899 Slc35a4-005 protein_coding Mus_musculus 0 372
ENSMUST00000170288 Slc35a4-003 processed_transcript Mus_musculus 0 337
ENSMUST00000168343 Slc35a4-004 processed_transcript Mus_musculus 8e-38 163

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