C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 35, member A4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033272 Slc35a4 10090 + 18:36679215-36683861 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000036158 Slc35a4-001 36679592-36683858 protein_coding
  ENSMUST00000050476 Slc35a4-002 36679579-36683853 protein_coding
  ENSMUST00000168343 Slc35a4-004 36679592-36680959 processed_transcript
  ENSMUST00000170288 Slc35a4-003 36679583-36681702 processed_transcript
  ENSMUST00000185899 Slc35a4-005 36679609-36681725 protein_coding
  ENSMUST00000186538 Slc35a4-201 36679215-36683861 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036158ENSMUST00000050476ENSMUST00000186538
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036158 47.511±3.95 88.696±2.36 26.366±0.61 14.681±7.28 65.139±7.90 71.574±12.76 20.263±1.06 40.502±4.15 20.083±14.26 52.937±3.42 11.107±0.42 76.892±35.71 22.274±8.81 4.012±0.13
ENSMUST00000050476 30.294±6.21 37.310±3.25 18.746±1.02 16.570±2.48 30.080±3.47 39.047±5.56 19.379±2.29 29.296±3.34 13.718±9.07 23.826±4.45 13.825±1.59 28.846±10.66 12.066±3.06 4.097±0.84
ENSMUST00000186538 N/A N/A N/A 7.819±0.00 N/A N/A N/A N/A 3.840±0.00 N/A N/A N/A N/A 4.218±0.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZN CIL_0006ZN_0002 CGP 18:36664060-36679366
CIL_0006ZI CIL_0006ZI_0002 CGP 18:36666681-36683861

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0003674 ND molecular_function
GO:0005351 IEA sugar:proton symporter activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008643 IEA carbohydrate transport
GO:0015992 IEA proton transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062379 slc35a4 solute carrier family 35, member A4 protein_coding Danio_rerio
ENSG00000176087 SLC35A4 solute carrier family 35, member A4 protein_coding Homo_sapiens

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