C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytokine receptor-like factor 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000176390 CRLF3 9606 - 17:30769388-30824776 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000324238 CRLF3-001 30782684-30824776 protein_coding
  ENST00000577725 CRLF3-005 30785107-30801420 processed_transcript
  ENST00000578692 CRLF3-002 30783936-30824671 nonsense_mediated_decay
  ENST00000583527 CRLF3-006 30772363-30785993 protein_coding
  ENST00000583805 CRLF3-004 30803927-30809986 processed_transcript
  ENST00000585268 CRLF3-007 30769388-30784413 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000324238ENST00000577725ENST00000578692
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000324238 1.395±0.00 5.700±0.00 1.226±0.00 1.805±0.50 1.592±0.00 2.421±0.00 0.355±0.00 1.051±0.00 1.460±0.96 3.802±1.12 0.966±0.00 3.700±1.47 4.092±0.55 5.880±0.79
ENST00000577725 11.416±0.00 18.805±0.00 0.091±0.00 3.736±3.44 5.884±5.43 4.248±3.62 5.701±0.00 9.518±0.00 5.597±0.00 63.483±0.00 6.234±0.00 0.871±0.93 0.098±0.00 3.617±3.18
ENST00000578692 1.153±0.00 N/A N/A N/A N/A N/A N/A N/A 1.670±0.00 N/A N/A 3.514±1.76 2.845±1.00 6.685±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000141 CIL_000141_0001 CGP 17:30769388-30895869

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000082 IMP G1/S transition of mitotic cell cycle
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0030308 IDA negative regulation of cell growth
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046427 IDA positive regulation of JAK-STAT cascade
GO:0071158 IDA positive regulation of cell cycle arrest

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070261 crlf3 cytokine receptor-like factor 3 protein_coding Danio_rerio
ENSMUSG00000017561 Crlf3 cytokine receptor-like factor 3 protein_coding Mus_musculus

Loading