C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000141_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000176390-ENSG00000176208 CGP 9606 17:30769388-30895869
GeneTranscriptPositionBiotype
ENSG00000176208 (ATAD5)
ATPase family, AAA domain containing 5 		ENST00000321990 (ATAD5-001) 30831970-30895869 protein_coding
ENST00000578295 (ATAD5-002) 30831970-30876439 non_stop_decay
ENST00000585133 (ATAD5-003) 30835209-30869852 retained_intron
ENSG00000176390 (CRLF3)
cytokine receptor-like factor 3 		ENST00000324238 (CRLF3-001) 30782684-30824776 protein_coding
ENST00000577725 (CRLF3-005) 30785107-30801420 processed_transcript
ENST00000578692 (CRLF3-002) 30783936-30824671 nonsense_mediated_decay
ENST00000583527 (CRLF3-006) 30772363-30785993 protein_coding
ENST00000583805 (CRLF3-004) 30803927-30809986 processed_transcript
ENST00000585268 (CRLF3-007) 30769388-30784413 processed_transcript
ENSG00000212190 (RNU6-298P)
RNA, U6 small nuclear 298, pseudogene 		ENST00000390888 (RNU6-298P-201) 30861843-30861938 snRNA
ENSG00000242439 (CTD-2349P21.1)
 ENST00000490847 (CTD-2349P21.1-001) 30830901-30831318 processed_pseudogene
ENSG00000263531 (RP13-753N3.1)
 ENST00000584157 (RP13-753N3.1-001) 30863921-30864940 antisense
ENSG00000264538 (SUZ12P1)
suppressor of zeste 12 homolog pseudogene 1 		ENST00000497969 (SUZ12P1-002) 30731706-30758335 processed_transcript
ENST00000578070 (SUZ12P1-005) 30709299-30770034 processed_transcript
ENST00000578195 (SUZ12P1-001) 30731886-30776402 transcribed_unprocessed_pseudogene
ENST00000579526 (SUZ12P1-004) 30709608-30768876 processed_transcript
ENST00000582329 (SUZ12P1-006) 30766503-30787711 processed_transcript
ENST00000582557 (SUZ12P1-003) 30734063-30770050 processed_transcript
ENST00000583950 (SUZ12P1-007) 30784646-30790908 processed_transcript
ENSG00000265334 (CTD-2349P21.11)
 ENST00000580873 (CTD-2349P21.11-001) 30834325-30863028 antisense
ENSG00000265791 (CTD-2349P21.10)
 ENST00000585212 (CTD-2349P21.10-001) 30781493-30782221 sense_intronic
ENSG00000266490 (CTD-2349P21.9)
 ENST00000580085 (CTD-2349P21.9-001) 30792372-30792833 lincRNA
ENSG00000276250 (CTD-2349P21.12)
 ENST00000621598 (CTD-2349P21.12-001) 30803654-30804077 antisense
CIL_000141_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017561-ENSMUSG00000017550 CGP 10090 11:80046493-80135794
GeneTranscriptPositionBiotype
ENSMUSG00000017550 (Atad5)
ATPase family, AAA domain containing 5 		ENSMUST00000017694 (Atad5-201) 80089400-80135791 protein_coding
ENSMUST00000108239 (Atad5-001) 80089400-80135794 protein_coding
ENSMUST00000151815 (Atad5-002) 80101884-80135794 processed_transcript
ENSMUST00000154168 (Atad5-003) 80103003-80108508 retained_intron
ENSMUSG00000017561 (Crlf3)
cytokine receptor-like factor 3 		ENSMUST00000061283 (Crlf3-001) 80046493-80080991 protein_coding
ENSMUST00000092858 (Crlf3-003) 80056095-80080936 processed_transcript
ENSMUST00000103233 (Crlf3-002) 80046493-80080938 protein_coding
ENSMUST00000147164 (Crlf3-004) 80056217-80057899 retained_intron
ENSMUST00000177825 (Crlf3-006) 80047481-80080912 nonsense_mediated_decay
ENSMUST00000178280 (Crlf3-005) 80062684-80080938 retained_intron
ENSMUST00000178893 (Crlf3-007) 80047481-80080929 nonsense_mediated_decay
ENSMUST00000179855 (Crlf3-008) 80059312-80080861 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000141_0001ENSG00000176208ENST00000321990ENST00000578295ENST00000585133ENSG00000176390ENST00000324238ENST00000577725ENST00000578692ENST00000583527ENST00000583805ENST00000585268ENSG00000212190ENST00000390888ENSG00000242439ENST00000490847ENSG00000263531ENST00000584157ENSG00000264538ENST00000497969ENST00000578070ENST00000578195ENST00000579526ENST00000582329ENST00000582557ENST00000583950ENSG00000265334ENST00000580873ENSG00000265791ENST00000585212ENSG00000266490ENST00000580085ENSG00000276250ENST00000621598CIL_000141_0002ENSMUSG00000017550ENSMUST00000017694ENSMUST00000108239ENSMUST00000151815ENSMUST00000154168ENSMUSG00000017561ENSMUST00000061283ENSMUST00000092858ENSMUST00000103233ENSMUST00000147164ENSMUST00000177825ENSMUST00000178280ENSMUST00000178893ENSMUST00000179855
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000141_0001ENSG00000176208ENST00000321990ENST00000578295ENST00000585133ENSG00000176390ENST00000324238ENST00000577725ENST00000578692ENSG00000212190ENST00000390888ENSG00000242439ENST00000490847ENSG00000263531ENST00000584157ENSG00000264538ENST00000497969ENST00000578070ENST00000578195ENST00000579526ENST00000582329ENST00000582557ENST00000583950ENSG00000265334ENST00000580873ENSG00000265791ENST00000585212ENSG00000266490ENST00000580085ENSG00000276250ENST00000621598CIL_000141_0002ENSMUSG00000017550ENSMUST00000017694ENSMUST00000108239ENSMUST00000151815ENSMUSG00000017561ENSMUST00000061283ENSMUST00000092858ENSMUST00000103233ENSMUST00000177825ENSMUST00000178893ENSMUST00000179855
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000176208 ENST00000321990 N/A 0.535±0.00 0.165±0.00 0.136±0.04 0.575±0.23 N/A 0.180±0.00 0.162±0.05 0.092±0.00 0.169±0.00 N/A 1.119±0.94 0.323±0.35 1.064±0.41
ENST00000578295 N/A N/A N/A N/A 0.348±0.00 0.451±0.00 0.078±0.00 N/A N/A N/A N/A 1.472±0.00 N/A N/A
ENST00000585133 N/A N/A N/A 0.232±0.00 N/A 0.049±0.00 0.053±0.00 N/A N/A N/A N/A N/A 0.137±0.00 N/A
ENSG00000176390 ENST00000324238 1.395±0.00 5.700±0.00 1.226±0.00 1.805±0.50 1.592±0.00 2.421±0.00 0.355±0.00 1.051±0.00 1.460±0.96 3.802±1.12 0.966±0.00 3.700±1.47 4.092±0.55 5.880±0.79
ENST00000577725 11.416±0.00 18.805±0.00 0.091±0.00 3.736±3.44 5.884±5.43 4.248±3.62 5.701±0.00 9.518±0.00 5.597±0.00 63.483±0.00 6.234±0.00 0.871±0.93 0.098±0.00 3.617±3.18
ENST00000578692 1.153±0.00 N/A N/A N/A N/A N/A N/A N/A 1.670±0.00 N/A N/A 3.514±1.76 2.845±1.00 6.685±0.00
ENST00000583527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000212190 ENST00000390888 N/A 1.709±0.00 N/A 0.417±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000242439 ENST00000490847 0.042±0.00 0.319±0.00 N/A N/A 0.047±0.00 N/A 0.087±0.00 N/A N/A 0.047±0.00 0.042±0.00 0.160±0.11 N/A 0.098±0.06
ENSG00000263531 ENST00000584157 0.014±0.00 0.949±0.00 N/A 0.213±0.18 0.280±0.00 0.036±0.00 0.043±0.02 0.230±0.06 N/A 0.046±0.00 N/A 0.164±0.03 0.107±0.01 0.117±0.02
ENSG00000264538 ENST00000497969 0.416±0.00 1.103±0.00 N/A N/A N/A N/A 0.255±0.00 1.100±0.00 N/A 0.556±0.00 0.194±0.00 N/A 0.485±0.00 N/A
ENST00000578070 N/A N/A N/A 1.873±0.81 0.458±0.00 0.792±0.00 0.280±0.00 1.005±0.00 N/A 1.524±0.00 0.172±0.00 N/A 0.439±0.10 N/A
ENST00000578195 N/A N/A N/A 2.598±0.00 N/A 1.163±0.00 0.207±0.00 N/A 1.103±0.00 N/A N/A 3.723±0.00 0.965±0.50 4.251±3.02
ENST00000579526 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.158±0.00 N/A N/A N/A N/A
ENST00000582329 0.360±0.00 1.642±0.00 N/A 2.540±0.42 1.069±0.00 0.540±0.00 0.381±0.00 0.982±0.00 0.129±0.00 0.518±0.00 0.676±0.00 1.714±0.07 0.440±0.17 3.184±1.23
ENST00000582557 0.430±0.00 0.619±0.00 0.614±0.00 1.156±0.00 1.593±1.31 0.897±0.33 0.287±0.04 0.377±0.00 0.137±0.00 1.033±0.75 0.049±0.00 2.901±0.14 0.623±0.00 1.552±0.93
ENST00000583950 0.488±0.00 1.965±0.00 N/A N/A 0.600±0.00 0.526±0.00 N/A 1.397±0.00 0.179±0.00 0.487±0.00 0.195±0.00 N/A N/A 1.283±0.00
ENSG00000265334 ENST00000580873 N/A N/A N/A N/A N/A 0.190±0.00 0.426±0.00 0.783±0.00 0.352±0.00 N/A 0.261±0.00 N/A N/A N/A
ENSG00000265791 ENST00000585212 0.511±0.00 N/A N/A N/A 0.676±0.00 0.333±0.00 0.173±0.00 0.290±0.02 0.349±0.00 0.395±0.00 N/A 0.451±0.18 0.159±0.00 0.294±0.00
ENSG00000266490 ENST00000580085 N/A N/A N/A 2.772±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000276250 ENST00000621598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.563±0.00 15.523±0.00 34.065±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017550 ENSMUST00000017694 0.049±0.00 0.272±0.08 0.157±0.00 0.294±0.01 0.113±0.07 0.218±0.09 0.046±0.02 0.042±0.02 0.824±1.32 0.114±0.04 0.087±0.03 0.475±0.17 0.882±0.51 0.343±0.15
ENSMUST00000108239 0.050±0.00 0.391±0.09 0.171±0.00 0.729±0.52 0.140±0.09 0.237±0.10 0.046±0.02 0.043±0.02 1.183±1.44 0.137±0.06 0.089±0.04 0.508±0.16 0.878±0.41 0.117±0.00
ENSMUST00000151815 0.262±0.07 N/A 0.347±0.10 1.681±1.23 0.239±0.08 0.360±0.14 0.069±0.03 0.065±0.05 2.079±2.75 0.369±0.00 0.113±0.04 0.631±0.15 1.120±0.87 0.307±0.03
ENSMUST00000154168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000017561 ENSMUST00000061283 5.328±0.14 2.085±0.27 5.693±0.65 3.356±0.91 12.495±3.34 3.585±0.86 3.239±0.63 3.817±1.16 17.921±16.68 14.740±0.76 0.606±0.63 5.841±1.63 10.139±3.00 2.438±0.34
ENSMUST00000092858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.737±0.27 N/A N/A N/A
ENSMUST00000103233 N/A N/A N/A 0.576±0.00 N/A N/A N/A N/A 4.841±2.49 2.204±0.00 0.330±0.04 2.139±0.58 2.783±0.00 0.870±0.05
ENSMUST00000147164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177825 N/A N/A N/A 3.229±0.00 N/A N/A N/A N/A N/A N/A N/A 8.491±0.00 7.219±0.00 2.946±0.00
ENSMUST00000178280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178893 N/A N/A N/A 7.187±0.00 8.086±0.00 N/A 1.184±0.00 N/A N/A N/A 0.777±0.17 6.894±1.65 11.348±4.94 2.846±0.00
ENSMUST00000179855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 42.919±0.00 N/A

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