C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat and SOCS box containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000176871 WSB2 9606 - 12:118032694-118062430 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000315436 WSB2-001 118032907-118061190 protein_coding
  ENST00000441406 WSB2-002 118034121-118062174 protein_coding
  ENST00000535496 WSB2-006 118034196-118052604 protein_coding
  ENST00000536602 WSB2-007 118042456-118061112 retained_intron
  ENST00000536738 WSB2-008 118036338-118061140 processed_transcript
  ENST00000537945 WSB2-005 118036441-118062410 protein_coding
  ENST00000540129 WSB2-003 118034675-118061089 retained_intron
  ENST00000542726 WSB2-004 118042878-118062430 processed_transcript
  ENST00000543186 WSB2-009 118035077-118042878 nonsense_mediated_decay
  ENST00000543218 WSB2-010 118034165-118061114 nonsense_mediated_decay
  ENST00000544233 WSB2-201 118032694-118061211 protein_coding
  ENST00000614776 WSB2-011 118035698-118036384 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000315436ENST00000441406ENST00000537945ENST00000543218ENST00000544233
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000315436 19.800±0.00 13.764±0.00 3.426±0.00 22.624±7.56 12.200±8.75 12.981±6.17 8.575±5.15 12.551±10.52 9.915±6.03 9.123±7.72 14.671±10.97 11.202±2.63 7.833±1.92 11.314±5.55
ENST00000441406 N/A N/A N/A 29.069±0.00 N/A N/A 8.667±5.44 2.168±0.00 N/A N/A 5.322±0.00 N/A N/A N/A
ENST00000537945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.714±0.00
ENST00000543218 N/A N/A N/A N/A 5.025±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544233 N/A N/A N/A 9.987±0.00 N/A N/A 1.128±0.00 5.795±0.00 5.053±0.00 5.488±0.00 N/A N/A 2.860±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QL CIL_0001QL_0002 CGP 12:118013588-118062430
CIL_0001QD CIL_0001QD_0002 CGP 12:118032694-118136026

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058608 wsb2 WD repeat and SOCS box-containing 2 protein_coding Danio_rerio
ENSMUSG00000029364 Wsb2 WD repeat and SOCS box-containing 2 protein_coding Mus_musculus

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