C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat and SOCS box containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000315436 WSB2-001 ENSG00000176871 9606 - 12:118032907-118061190 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000315436
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000315436 19.800±0.00 13.764±0.00 3.426±0.00 22.624±7.56 12.200±8.75 12.981±6.17 8.575±5.15 12.551±10.52 9.915±6.03 9.123±7.72 14.671±10.97 11.202±2.63 7.833±1.92 11.314±5.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QL CIL_0001QL_0002 CGP 12:118013588-118062430
CIL_0001QD CIL_0001QD_0002 CGP 12:118032694-118136026

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031309 Wsb2-001 protein_coding Mus_musculus 0 1561
ENSMUST00000111959 Wsb2-002 protein_coding Mus_musculus 0 1458
ENSMUST00000149669 Wsb2-005 retained_intron Mus_musculus 0 571
ENSMUST00000136895 Wsb2-006 retained_intron Mus_musculus 0 425
ENSMUST00000185210 RP23-461J11.1-001 processed_pseudogene Mus_musculus 0 326
ENSMUST00000086461 Rfc5-001 protein_coding Mus_musculus 1e-36 159
ENSMUST00000150962 Rfc5-002 retained_intron Mus_musculus 5e-25 121

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