C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat and SOCS box containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000544233 WSB2-201 ENSG00000176871 9606 - 12:118032694-118061211 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverLungPlacentaENST00000544233
Transcript ID Brain Heart Kidney Liver Lung Placenta
ENST00000544233 9.987±0.00 1.128±0.00 5.795±0.00 5.053±0.00 5.488±0.00 2.860±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QL CIL_0001QL_0002 CGP 12:118013588-118062430
CIL_0001QD CIL_0001QD_0002 CGP 12:118032694-118136026

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111959 Wsb2-002 protein_coding Mus_musculus 0 811
ENSMUST00000031309 Wsb2-001 protein_coding Mus_musculus 0 811
ENSMUST00000149669 Wsb2-005 retained_intron Mus_musculus 0 571
ENSMUST00000136895 Wsb2-006 retained_intron Mus_musculus 0 425
ENSMUST00000185210 RP23-461J11.1-001 processed_pseudogene Mus_musculus 0 326
ENSMUST00000086461 Rfc5-001 protein_coding Mus_musculus 9e-37 159
ENSMUST00000150962 Rfc5-002 retained_intron Mus_musculus 4e-25 121

Loading