C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, DHHC-type containing 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177054 ZDHHC13 9606 + 11:19117099-19176422 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000399351 ZDHHC13-002 19117145-19176415 protein_coding
  ENST00000446113 ZDHHC13-001 19117129-19176415 protein_coding
  ENST00000524744 ZDHHC13-006 19117184-19118817 processed_transcript
  ENST00000525490 ZDHHC13-003 19117156-19176422 retained_intron
  ENST00000530100 ZDHHC13-005 19164282-19166716 retained_intron
  ENST00000530698 ZDHHC13-008 19148670-19152625 processed_transcript
  ENST00000532026 ZDHHC13-009 19117099-19149255 processed_transcript
  ENST00000532812 ZDHHC13-007 19148614-19155931 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000399351ENST00000446113ENST00000525490ENST00000530100ENST00000532812
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000399351 0.941±0.00 0.787±0.00 N/A 0.695±0.08 0.987±0.24 N/A N/A 1.759±0.00 0.319±0.00 N/A 0.365±0.00 1.371±0.58 0.694±0.01 1.145±0.00
ENST00000446113 0.681±0.00 1.728±0.00 N/A 2.013±1.08 N/A 2.494±0.00 0.194±0.00 2.007±0.00 N/A 1.047±0.00 N/A 4.075±2.32 1.956±0.51 5.492±1.83
ENST00000525490 N/A N/A 0.169±0.00 N/A 0.604±0.00 N/A 0.062±0.00 0.058±0.00 0.216±0.00 N/A 0.111±0.00 N/A N/A N/A
ENST00000530100 N/A N/A 0.666±0.00 N/A N/A N/A N/A 0.228±0.00 N/A N/A 0.671±0.00 N/A N/A N/A
ENST00000532812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.392±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RI CIL_0008RI_0001 VISTA 11:18872537-19474989
CIL_0008YB CIL_0008YB_0001 VISTA 11:18916805-19520451
CIL_00035X CIL_00035X_0001 CGP 11:19054455-19176422
CIL_0007H7 CIL_0007H7_0002 CGP 11:19117099-19210573

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 ISS Golgi membrane
GO:0004871 IMP signal transducer activity
GO:0005515 IEA protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0007165 IMP signal transduction
GO:0008152 IEA metabolic process
GO:0008270 IEA zinc ion binding
GO:0015095 ISS magnesium ion transmembrane transporter activity
GO:0015693 IEA magnesium ion transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016409 ISS palmitoyltransferase activity
GO:0019706 IEA protein-cysteine S-palmitoyltransferase activity
GO:0030660 ISS Golgi-associated vesicle membrane
GO:0043123 IMP positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025868 zdhhc13 zinc finger, DHHC-type containing 13 protein_coding Danio_rerio
ENSMUSG00000030471 Zdhhc13 zinc finger, DHHC domain containing 13 protein_coding Mus_musculus

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