C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, DHHC domain containing 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030471 Zdhhc13 10090 + 7:48789003-48827440 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000118927 Zdhhc13-001 48789003-48827440 protein_coding
  ENSMUST00000125280 Zdhhc13-002 48789026-48824717 protein_coding
  ENSMUST00000139125 Zdhhc13-003 48789032-48802921 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118927ENSMUST00000125280ENSMUST00000139125
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118927 2.708±1.27 1.839±0.56 15.425±6.65 7.013±2.88 2.200±0.88 5.508±2.03 1.716±0.59 2.128±0.88 3.547±2.78 2.111±0.70 1.245±0.33 2.592±1.88 20.858±5.67 2.046±0.54
ENSMUST00000125280 3.377±0.68 0.970±0.43 2.779±0.00 5.024±2.20 2.864±1.05 12.141±6.58 1.789±0.62 1.861±0.52 1.757±0.93 3.217±1.08 0.445±0.11 9.013±2.88 8.071±0.00 2.742±1.40
ENSMUST00000139125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.047±0.00 80.629±1.81 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RI CIL_0008RI_0002 VISTA 7:48524185-49126415
CIL_0008YB CIL_0008YB_0002 VISTA 7:48559718-49163012
CIL_00035X CIL_00035X_0002 CGP 7:48642803-48827440
CIL_0007H7 CIL_0007H7_0003 CGP 7:48789003-48848051

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0004871 IEA signal transducer activity
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0007165 IEA signal transduction
GO:0008152 IEA metabolic process
GO:0008270 IEA zinc ion binding
GO:0015095 IDA magnesium ion transmembrane transporter activity
GO:0015693 IDA magnesium ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016409 IDA palmitoyltransferase activity
GO:0019706 IEA protein-cysteine S-palmitoyltransferase activity
GO:0030660 IDA Golgi-associated vesicle membrane
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 IEA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025868 zdhhc13 zinc finger, DHHC-type containing 13 protein_coding Danio_rerio
ENSG00000177054 ZDHHC13 zinc finger, DHHC-type containing 13 protein_coding Homo_sapiens

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