C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, DHHC-type containing 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399351 ZDHHC13-002 ENSG00000177054 9606 + 11:19117145-19176415 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLiverMuscleOvaryPlacentaTestisENST00000399351
Transcript ID Adipose Adrenal Brain Breast Kidney Liver Muscle Ovary Placenta Testis
ENST00000399351 0.941±0.00 0.787±0.00 0.695±0.08 0.987±0.24 1.759±0.00 0.319±0.00 0.365±0.00 1.371±0.58 0.694±0.01 1.145±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RI CIL_0008RI_0001 VISTA 11:18872537-19474989
CIL_0008YB CIL_0008YB_0001 VISTA 11:18916805-19520451
CIL_00035X CIL_00035X_0001 CGP 11:19054455-19176422
CIL_0007H7 CIL_0007H7_0002 CGP 11:19117099-19210573

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 ISS Golgi membrane
GO:0004871 IMP signal transducer activity
GO:0005515 IEA protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0007165 IMP signal transduction
GO:0008152 IEA metabolic process
GO:0008270 IEA zinc ion binding
GO:0015095 ISS magnesium ion transmembrane transporter activity
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016409 ISS palmitoyltransferase activity
GO:0019706 IEA protein-cysteine S-palmitoyltransferase activity
GO:0030660 ISS Golgi-associated vesicle membrane
GO:0043123 IMP positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118927 Zdhhc13-001 protein_coding Mus_musculus 0 2220
ENSMUST00000125280 Zdhhc13-002 protein_coding Mus_musculus 0 2043
ENSMUST00000139125 Zdhhc13-003 processed_transcript Mus_musculus 0 294

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