C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CASK interacting protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177303 CASKIN2 9606 - 17:75500261-75515583 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000321617 CASKIN2-001 75500261-75515583 protein_coding
  ENST00000433559 CASKIN2-003 75500809-75509888 protein_coding
  ENST00000580021 CASKIN2-007 75503090-75503940 retained_intron
  ENST00000580075 CASKIN2-008 75513728-75515260 protein_coding
  ENST00000581870 CASKIN2-002 75505319-75515440 protein_coding
  ENST00000583246 CASKIN2-006 75506743-75507635 retained_intron
  ENST00000583258 CASKIN2-005 75506667-75507851 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000321617ENST00000433559ENST00000580021ENST00000580075ENST00000581870
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000321617 21.430±0.00 12.771±0.00 14.224±0.00 5.483±4.54 9.060±0.00 6.739±0.00 8.649±8.48 3.760±0.00 41.637±0.00 4.642±0.00 13.884±9.58 10.966±6.69 5.961±4.30
ENST00000433559 9.809±0.00 N/A N/A 2.904±0.00 N/A N/A N/A N/A N/A N/A 4.138±0.00 5.104±0.00 0.921±0.00
ENST00000580021 N/A N/A N/A N/A N/A N/A 0.628±0.00 N/A N/A N/A N/A N/A N/A
ENST00000580075 N/A N/A N/A N/A N/A N/A 3.563±0.00 N/A N/A N/A N/A N/A N/A
ENST00000581870 N/A N/A N/A N/A N/A N/A 0.241±0.00 N/A 1.755±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0001 VISTA 17:75051738-75652852
CIL_0001FY CIL_0001FY_0001 CGP 17:75441159-75515583
CIL_0007IY CIL_0007IY_0001 CGP 17:75500261-75524739

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043818 CASKIN2 (2 of 4) CASK interacting protein 2 protein_coding Danio_rerio
ENSDARG00000068462 CASKIN2 (3 of 4) CASK interacting protein 2 protein_coding Danio_rerio
ENSDARG00000090611 CASKIN2 (4 of 4) CASK interacting protein 2 protein_coding Danio_rerio
ENSMUSG00000034471 Caskin2 CASK-interacting protein 2 protein_coding Mus_musculus

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