C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CASK interacting protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000433559 CASKIN2-003 ENSG00000177303 9606 - 17:75500809-75509888 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastOvaryPlacentaTestisENST00000433559
Transcript ID Adipose Breast Ovary Placenta Testis
ENST00000433559 9.809±0.00 2.904±0.00 4.138±0.00 5.104±0.00 0.921±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0001 VISTA 17:75051738-75652852
CIL_0001FY CIL_0001FY_0001 CGP 17:75441159-75515583
CIL_0007IY CIL_0007IY_0001 CGP 17:75500261-75524739

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041684 Caskin2-001 protein_coding Mus_musculus 0 3666
ENSMUST00000132780 Caskin2-003 protein_coding Mus_musculus 0 950
ENSMUST00000156812 Caskin2-002 protein_coding Mus_musculus 0 313

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