C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CASK interacting protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000321617 CASKIN2-001 ENSG00000177303 9606 - 17:75500261-75515583 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000321617
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000321617 21.430±0.00 12.771±0.00 14.224±0.00 5.483±4.54 9.060±0.00 6.739±0.00 8.649±8.48 3.760±0.00 41.637±0.00 4.642±0.00 13.884±9.58 10.966±6.69 5.961±4.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0001 VISTA 17:75051738-75652852
CIL_0001FY CIL_0001FY_0001 CGP 17:75441159-75515583
CIL_0007IY CIL_0007IY_0001 CGP 17:75500261-75524739

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041684 Caskin2-001 protein_coding Mus_musculus 0 4054
ENSMUST00000132780 Caskin2-003 protein_coding Mus_musculus 0 946
ENSMUST00000156812 Caskin2-002 protein_coding Mus_musculus 0 612

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