C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007IY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000177303-ENSG00000182173 CGP 9606 17:75500261-75524739
GeneTranscriptPositionBiotype
ENSG00000177303 (CASKIN2)
CASK interacting protein 2 		ENST00000321617 (CASKIN2-001) 75500261-75515583 protein_coding
ENST00000433559 (CASKIN2-003) 75500809-75509888 protein_coding
ENST00000580021 (CASKIN2-007) 75503090-75503940 retained_intron
ENST00000580075 (CASKIN2-008) 75513728-75515260 protein_coding
ENST00000581870 (CASKIN2-002) 75505319-75515440 protein_coding
ENST00000583246 (CASKIN2-006) 75506743-75507635 retained_intron
ENST00000583258 (CASKIN2-005) 75506667-75507851 retained_intron
ENSG00000182173 (TSEN54)
TSEN54 tRNA splicing endonuclease subunit 		ENST00000333213 (TSEN54-001) 75516525-75524739 protein_coding
ENST00000434205 (TSEN54-005) 75516060-75519047 protein_coding
ENST00000545228 (TSEN54-012) 75521993-75524693 protein_coding
ENST00000577197 (TSEN54-014) 75523602-75524733 retained_intron
ENST00000578415 (TSEN54-008) 75516812-75522115 nonsense_mediated_decay
ENST00000579449 (TSEN54-013) 75522826-75524420 retained_intron
ENST00000580013 (TSEN54-010) 75516536-75521438 processed_transcript
ENST00000583173 (TSEN54-007) 75516561-75523287 nonsense_mediated_decay
ENST00000583454 (TSEN54-006) 75516526-75517475 retained_intron
ENST00000583634 (TSEN54-009) 75516970-75517651 retained_intron
ENST00000583818 (TSEN54-011) 75516795-75521897 nonsense_mediated_decay
CIL_0007IY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034471-ENSMUSG00000020781 CGP 10090 11:115799183-115823094
GeneTranscriptPositionBiotype
ENSMUSG00000020747 (2310067B10Rik)
RIKEN cDNA 2310067B10 gene 		ENSMUST00000093912 (2310067B10Rik-001) 115765433-115799366 protein_coding
ENSMUST00000103033 (2310067B10Rik-002) 115775756-115799033 protein_coding
ENSMUST00000103034 (2310067B10Rik-006) 115765443-115786266 protein_coding
ENSMUST00000125918 (2310067B10Rik-007) 115788954-115791978 protein_coding
ENSMUST00000134948 (2310067B10Rik-005) 115766721-115777367 processed_transcript
ENSMUST00000136720 (2310067B10Rik-003) 115765442-115785942 protein_coding
ENSMUST00000141871 (2310067B10Rik-004) 115765454-115786185 protein_coding
ENSMUSG00000020781 (Tsen54)
tRNA splicing endonuclease 54 homolog (S. cerevisiae) 		ENSMUST00000021134 (Tsen54-001) 115814724-115823094 protein_coding
ENSMUST00000106481 (Tsen54-002) 115814724-115823094 protein_coding
ENSMUST00000128266 (Tsen54-004) 115814805-115820507 retained_intron
ENSMUST00000129765 (Tsen54-006) 115814746-115815545 retained_intron
ENSMUST00000136343 (Tsen54-005) 115815698-115821699 protein_coding
ENSMUST00000141748 (Tsen54-003) 115814771-115820528 retained_intron
ENSMUST00000154304 (Tsen54-007) 115820710-115823089 protein_coding
ENSMUST00000157061 (Tsen54-008) 115820846-115822269 protein_coding
ENSMUSG00000034471 (Caskin2)
CASK-interacting protein 2 		ENSMUST00000041684 (Caskin2-001) 115799183-115813630 protein_coding
ENSMUST00000125658 (Caskin2-004) 115800000-115800881 processed_transcript
ENSMUST00000132780 (Caskin2-003) 115804736-115808102 protein_coding
ENSMUST00000156812 (Caskin2-002) 115806777-115813639 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007IY_0001ENSG00000177303ENST00000321617ENST00000433559ENST00000580021ENST00000580075ENST00000581870ENST00000583246ENST00000583258ENSG00000182173ENST00000333213ENST00000434205ENST00000545228ENST00000577197ENST00000578415ENST00000579449ENST00000580013ENST00000583173ENST00000583454ENST00000583634ENST00000583818CIL_0007IY_0002ENSMUSG00000020747ENSMUST00000093912ENSMUST00000103033ENSMUST00000103034ENSMUST00000125918ENSMUST00000134948ENSMUST00000136720ENSMUST00000141871ENSMUSG00000020781ENSMUST00000021134ENSMUST00000106481ENSMUST00000128266ENSMUST00000129765ENSMUST00000136343ENSMUST00000141748ENSMUST00000154304ENSMUST00000157061ENSMUSG00000034471ENSMUST00000041684ENSMUST00000125658ENSMUST00000132780ENSMUST00000156812
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007IY_0001ENSG00000177303ENST00000321617ENST00000433559ENST00000580021ENST00000580075ENST00000581870ENSG00000182173ENST00000333213ENST00000434205ENST00000545228ENST00000577197ENST00000578415ENST00000579449ENST00000583173ENST00000583818CIL_0007IY_0002ENSMUSG00000020747ENSMUST00000093912ENSMUST00000103033ENSMUSG00000020781ENSMUST00000021134ENSMUST00000106481ENSMUST00000128266ENSMUST00000129765ENSMUST00000136343ENSMUST00000141748ENSMUST00000154304ENSMUSG00000034471ENSMUST00000041684
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000177303 ENST00000321617 21.430±0.00 12.771±0.00 N/A 14.224±0.00 5.483±4.54 9.060±0.00 6.739±0.00 8.649±8.48 3.760±0.00 41.637±0.00 4.642±0.00 13.884±9.58 10.966±6.69 5.961±4.30
ENST00000433559 9.809±0.00 N/A N/A N/A 2.904±0.00 N/A N/A N/A N/A N/A N/A 4.138±0.00 5.104±0.00 0.921±0.00
ENST00000580021 N/A N/A N/A N/A N/A N/A N/A 0.628±0.00 N/A N/A N/A N/A N/A N/A
ENST00000580075 N/A N/A N/A N/A N/A N/A N/A 3.563±0.00 N/A N/A N/A N/A N/A N/A
ENST00000581870 N/A N/A N/A N/A N/A N/A N/A 0.241±0.00 N/A 1.755±0.00 N/A N/A N/A N/A
ENST00000583246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000182173 ENST00000333213 2.148±0.00 3.180±0.00 N/A N/A 2.594±0.00 1.388±0.00 1.538±0.00 4.032±0.00 2.362±2.20 7.341±0.00 2.379±0.00 5.987±0.82 4.319±1.21 3.021±0.39
ENST00000434205 N/A N/A N/A N/A 0.706±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545228 N/A N/A N/A N/A 2.181±0.00 0.632±0.00 N/A N/A 1.545±0.00 6.028±0.00 1.147±0.00 8.797±3.32 1.716±0.59 6.865±0.00
ENST00000577197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.651±0.00 N/A N/A
ENST00000578415 N/A N/A 0.375±0.00 0.370±0.00 0.719±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579449 N/A N/A N/A 0.937±0.00 N/A N/A N/A 0.670±0.00 N/A N/A N/A N/A N/A N/A
ENST00000580013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583173 N/A N/A N/A 1.335±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583818 N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020747 ENSMUST00000093912 8.714±2.53 16.743±4.59 6.564±1.93 10.191±3.76 8.524±1.81 22.904±7.79 11.686±4.33 13.861±3.71 4.833±2.20 15.942±3.95 3.429±0.65 12.983±3.88 3.496±1.64 10.990±3.55
ENSMUST00000103033 N/A 13.606±2.79 N/A 3.936±0.43 4.843±0.00 11.953±0.00 8.519±1.43 N/A 1.511±0.00 10.261±0.00 3.592±1.24 11.737±6.17 10.525±5.36 6.056±0.97
ENSMUST00000103034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000020781 ENSMUST00000021134 8.113±2.04 6.625±1.14 8.277±1.09 6.871±4.95 5.893±1.63 10.936±1.97 3.990±1.19 11.851±1.96 5.886±3.22 7.324±0.27 2.767±0.63 8.029±2.75 9.236±5.65 2.060±0.77
ENSMUST00000106481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.283±0.00 N/A
ENSMUST00000128266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.251±0.00 2.830±0.00 N/A N/A
ENSMUST00000129765 N/A 12.975±2.33 N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.842±1.16 N/A 1.502±0.00
ENSMUST00000136343 N/A N/A N/A 2.505±0.00 N/A N/A N/A N/A N/A N/A 1.097±0.34 17.274±0.00 16.051±1.66 1.304±0.00
ENSMUST00000141748 N/A 5.198±0.96 N/A N/A 3.522±0.00 4.484±0.35 N/A N/A N/A 3.338±0.00 N/A 6.203±1.03 6.153±0.25 1.795±0.00
ENSMUST00000154304 2.566±0.00 11.867±2.12 N/A 1.092±0.00 6.833±1.13 7.443±0.34 N/A 4.092±0.33 2.278±0.39 3.852±0.61 1.161±0.00 10.515±2.20 N/A 0.445±0.00
ENSMUST00000157061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000034471 ENSMUST00000041684 16.593±3.09 40.078±1.69 10.964±0.44 8.124±1.19 12.263±4.78 38.916±5.68 13.474±3.42 16.792±2.18 4.784±1.84 47.922±9.34 5.542±0.50 20.075±6.00 9.685±6.75 3.551±0.19
ENSMUST00000125658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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