C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA binding motif protein 44
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177483 RBM44 9606 + 2:237798389-237842808 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000316997 RBM44-201 237798745-237842807 protein_coding
  ENST00000409864 RBM44-004 237799178-237834437 protein_coding
  ENST00000444524 RBM44-003 237798752-237820336 processed_transcript
  ENST00000480583 RBM44-001 237798389-237842808 retained_intron
  ENST00000491996 RBM44-005 237833993-237834871 retained_intron
  ENST00000611254 RBM44-202 237813664-237841869 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000316997ENST00000409864ENST00000611254
Transcript ID Testis
ENST00000316997 4.406±0.51
ENST00000409864 6.656±0.00
ENST00000611254 18.245±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RW CIL_0007RW_0001 VISTA 2:237313736-237917924
CIL_0002H4 CIL_0002H4_0001 CGP 2:237574322-237813682
CIL_0008D3 CIL_0008D3_0001 VISTA 2:237594726-238198955
CIL_0003XV CIL_0003XV_0001 CGP 2:237627576-237842808
CIL_0003XU CIL_0003XU_0001 CGP 2:237798389-237912114

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0042803 ISS protein homodimerization activity
GO:0045171 ISS intercellular bridge

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069758 RBM44 RNA binding motif protein 44 protein_coding Danio_rerio
ENSMUSG00000070732 Rbm44 RNA binding motif protein 44 protein_coding Mus_musculus

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