C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA binding motif protein 44
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000070732 Rbm44 10090 + 1:91145089-91170795 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000094698 Rbm44-001 91145103-91170795 protein_coding
  ENSMUST00000185229 Rbm44-004 91168629-91170293 retained_intron
  ENSMUST00000188818 Rbm44-003 91145101-91152725 protein_coding
  ENSMUST00000190965 Rbm44-002 91145089-91147758 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000094698ENSMUST00000185229ENSMUST00000188818ENSMUST00000190965
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000094698 0.038±0.01 0.042±0.00 0.017±0.00 0.009±0.00 0.032±0.00 0.009±0.00 0.015±0.01 0.123±0.09 0.015±0.00 0.085±0.04 0.160±0.15 5.804±3.85
ENSMUST00000185229 N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A N/A 0.066±0.01 0.238±0.00 N/A
ENSMUST00000188818 0.093±0.00 N/A 0.059±0.00 N/A N/A N/A N/A N/A N/A 0.408±0.00 2.820±0.00 70.222±0.00
ENSMUST00000190965 N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 0.071±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RW CIL_0007RW_0002 VISTA 1:90676298-91284359
CIL_0008D3 CIL_0008D3_0002 VISTA 1:90908179-91512308
CIL_0003XV CIL_0003XV_0002 CGP 1:90998737-91170795
CIL_0003XU CIL_0003XU_0002 CGP 1:91145089-91225196

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0008150 ND biological_process
GO:0042803 IDA protein homodimerization activity
GO:0045171 IDA intercellular bridge

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069758 RBM44 RNA binding motif protein 44 protein_coding Danio_rerio
ENSG00000177483 RBM44 RNA binding motif protein 44 protein_coding Homo_sapiens

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