C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002H4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124839-ENSG00000124831 CGP 9606 2:237574322-237813682
GeneTranscriptPositionBiotype
ENSG00000124831 (LRRFIP1)
leucine rich repeat (in FLII) interacting protein 1 		ENST00000244815 (LRRFIP1-001) 237692216-237765915 protein_coding
ENST00000289175 (LRRFIP1-004) 237692145-237765279 protein_coding
ENST00000308482 (LRRFIP1-002) 237627576-237780315 protein_coding
ENST00000392000 (LRRFIP1-003) 237692339-237764961 protein_coding
ENST00000420665 (LRRFIP1-005) 237692333-237749300 protein_coding
ENST00000464608 (LRRFIP1-015) 237771944-237779561 retained_intron
ENST00000465870 (LRRFIP1-011) 237627607-237722131 retained_intron
ENST00000468950 (LRRFIP1-009) 237769626-237774227 processed_transcript
ENST00000473815 (LRRFIP1-007) 237692494-237735676 processed_transcript
ENST00000474195 (LRRFIP1-010) 237771982-237780309 retained_intron
ENST00000478958 (LRRFIP1-008) 237768197-237780315 retained_intron
ENST00000483443 (LRRFIP1-014) 237756095-237770776 retained_intron
ENST00000489295 (LRRFIP1-013) 237683404-237684473 processed_transcript
ENST00000489603 (LRRFIP1-016) 237769732-237813682 processed_transcript
ENST00000498053 (LRRFIP1-012) 237683404-237756175 processed_transcript
ENSG00000124839 (RAB17)
RAB17, member RAS oncogene family 		ENST00000264601 (RAB17-001) 237574322-237591093 protein_coding
ENST00000392001 (RAB17-002) 237574322-237591071 nonsense_mediated_decay
ENST00000409576 (RAB17-007) 237574327-237590660 protein_coding
ENST00000409822 (RAB17-011) 237574738-237590780 protein_coding
ENST00000411462 (RAB17-005) 237575458-237590734 protein_coding
ENST00000414278 (RAB17-003) 237574355-237590715 nonsense_mediated_decay
ENST00000416106 (RAB17-006) 237585403-237590731 processed_transcript
ENST00000430445 (RAB17-008) 237576584-237586099 protein_coding
ENST00000466244 (RAB17-009) 237574690-237575884 retained_intron
ENST00000477149 (RAB17-004) 237574326-237579570 retained_intron
ENST00000487008 (RAB17-010) 237590525-237601614 processed_transcript
ENSG00000177483 (RBM44)
RNA binding motif protein 44 		ENST00000316997 (RBM44-201) 237798745-237842807 protein_coding
ENST00000409864 (RBM44-004) 237799178-237834437 protein_coding
ENST00000444524 (RBM44-003) 237798752-237820336 processed_transcript
ENST00000480583 (RBM44-001) 237798389-237842808 retained_intron
ENST00000491996 (RBM44-005) 237833993-237834871 retained_intron
ENST00000611254 (RBM44-202) 237813664-237841869 protein_coding
ENSG00000227107 (AC096574.5)
 ENST00000417947 (AC096574.5-001) 237612977-237626525 lincRNA
ENSG00000234949 (AC104667.3)
 ENST00000452801 (AC104667.3-001) 237591169-237595981 antisense
ENST00000470375 (AC104667.3-002) 237591020-237592006 antisense
CIL_0002H4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026304-ENSMUSG00000026305 CGP 10090 1:90958133-91128944
GeneTranscriptPositionBiotype
ENSMUSG00000026304 (Rab17)
RAB17, member RAS oncogene family 		ENSMUST00000027529 (Rab17-001) 90958133-90969661 protein_coding
ENSMUST00000128226 (Rab17-005) 90958731-90969548 processed_transcript
ENSMUST00000130042 (Rab17-004) 90960001-90969644 protein_coding
ENSMUST00000131428 (Rab17-002) 90958135-90967667 protein_coding
ENSMUST00000135819 (Rab17-003) 90958854-90967617 processed_transcript
ENSMUSG00000026305 (Lrrfip1)
leucine rich repeat (in FLII) interacting protein 1 		ENSMUST00000068116 (Lrrfip1-001) 90998779-91128940 protein_coding
ENSMUST00000068167 (Lrrfip1-201) 91053444-91128944 protein_coding
ENSMUST00000097649 (Lrrfip1-003) 91053454-91117315 protein_coding
ENSMUST00000097650 (Lrrfip1-005) 91053507-91128918 protein_coding
ENSMUST00000185531 (Lrrfip1-004) 90998777-91122539 protein_coding
ENSMUST00000186762 (Lrrfip1-009) 91053507-91100581 protein_coding
ENSMUST00000187375 (Lrrfip1-010) 91119960-91122525 processed_transcript
ENSMUST00000187532 (Lrrfip1-011) 91125356-91128178 retained_intron
ENSMUST00000188094 (Lrrfip1-007) 91111214-91116921 processed_transcript
ENSMUST00000188708 (Lrrfip1-008) 91111233-91114852 processed_transcript
ENSMUST00000189505 (Lrrfip1-002) 90998737-91108640 protein_coding
ENSMUST00000189617 (Lrrfip1-006) 91053586-91128287 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002H4_0001ENSG00000124831ENST00000244815ENST00000289175ENST00000308482ENST00000392000ENST00000478958ENSG00000124839ENST00000264601ENST00000392001ENST00000409576ENST00000414278ENST00000466244ENST00000477149ENSG00000177483ENST00000316997ENST00000409864ENST00000611254ENSG00000227107ENST00000417947ENSG00000234949ENST00000452801ENST00000470375CIL_0002H4_0002ENSMUSG00000026304ENSMUST00000027529ENSMUST00000128226ENSMUST00000130042ENSMUST00000131428ENSMUST00000135819ENSMUSG00000026305ENSMUST00000068116ENSMUST00000068167ENSMUST00000097649ENSMUST00000097650ENSMUST00000185531ENSMUST00000187532ENSMUST00000188094ENSMUST00000189505
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124831 ENST00000244815 N/A N/A 1.339±0.00 1.961±0.00 4.192±0.00 N/A 3.019±0.00 5.831±3.16 6.536±0.00 15.237±0.00 N/A 6.364±0.00 3.300±0.00 N/A
ENST00000289175 6.713±0.00 9.716±0.00 3.063±0.00 2.797±0.00 3.436±0.00 6.028±1.28 3.445±0.00 4.105±1.97 3.605±1.07 7.863±0.00 N/A 13.729±13.94 16.486±14.11 5.180±0.00
ENST00000308482 17.711±0.00 16.830±0.00 N/A 5.911±4.01 N/A N/A 16.935±9.23 N/A N/A N/A 13.256±10.64 7.045±0.37 N/A 11.344±0.00
ENST00000392000 N/A N/A 1.255±0.00 N/A 2.134±0.00 N/A N/A N/A 2.600±0.00 N/A N/A N/A N/A N/A
ENST00000420665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.087±7.38 N/A N/A
ENST00000483443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000124839 ENST00000264601 N/A N/A 3.624±0.00 0.086±0.00 N/A N/A N/A 10.554±4.19 7.379±0.00 0.551±0.00 N/A 3.540±0.70 3.006±1.55 0.341±0.00
ENST00000392001 N/A N/A N/A N/A N/A N/A 0.471±0.00 N/A N/A 0.529±0.00 N/A N/A N/A N/A
ENST00000409576 N/A N/A 4.626±0.00 N/A N/A N/A N/A 17.106±0.00 1.001±0.00 N/A N/A N/A N/A N/A
ENST00000409822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000411462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000414278 0.170±0.00 N/A N/A 0.224±0.00 1.207±0.00 1.328±0.00 N/A 33.486±0.00 38.715±0.00 7.670±0.00 N/A 4.459±3.04 8.568±3.65 1.315±0.84
ENST00000416106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466244 N/A 0.760±0.00 N/A 0.236±0.09 0.689±0.00 0.462±0.00 0.430±0.00 N/A N/A N/A 0.068±0.00 4.320±3.27 N/A N/A
ENST00000477149 N/A 0.171±0.00 0.539±0.00 N/A 0.138±0.00 0.261±0.00 0.070±0.00 N/A 0.036±0.00 1.032±0.32 N/A 1.240±1.00 N/A 0.211±0.13
ENST00000487008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177483 ENST00000316997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.406±0.51
ENST00000409864 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.656±0.00
ENST00000444524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.245±0.00
ENSG00000227107 ENST00000417947 0.017±0.00 0.018±0.00 N/A 0.161±0.14 0.010±0.00 0.036±0.00 0.073±0.05 0.076±0.00 0.034±0.02 N/A 0.489±0.00 0.043±0.02 0.088±0.00 0.034±0.00
ENSG00000234949 ENST00000452801 N/A N/A N/A 0.153±0.11 0.303±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470375 0.197±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.164±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026304 ENSMUST00000027529 0.482±0.02 N/A 1.159±0.04 0.046±0.00 0.708±0.30 3.681±1.68 0.307±0.14 8.858±1.89 4.651±3.63 0.532±0.10 N/A 0.629±0.29 3.294±1.87 0.164±0.00
ENSMUST00000128226 N/A 0.118±0.00 N/A N/A N/A 0.846±0.00 N/A N/A N/A N/A N/A 0.627±0.30 N/A N/A
ENSMUST00000130042 N/A 0.097±0.00 N/A 0.039±0.00 1.276±0.00 N/A 0.233±0.00 N/A N/A 0.457±0.12 0.124±0.01 0.706±0.26 N/A 0.301±0.18
ENSMUST00000131428 0.059±0.00 N/A N/A 0.019±0.00 N/A 1.690±0.00 0.138±0.00 7.239±0.61 1.490±0.00 N/A 0.029±0.01 0.802±0.34 0.943±1.04 0.044±0.00
ENSMUST00000135819 N/A N/A N/A 0.108±0.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.069±0.00
ENSMUSG00000026305 ENSMUST00000068116 2.484±0.28 N/A 27.345±0.22 6.622±0.99 N/A 5.563±0.00 4.103±0.75 2.189±0.51 1.368±0.68 8.272±1.36 14.648±2.09 5.076±2.87 7.306±2.83 0.205±0.10
ENSMUST00000068167 N/A N/A N/A N/A N/A 3.091±0.00 N/A N/A N/A N/A 6.461±0.00 N/A N/A 0.101±0.00
ENSMUST00000097649 2.030±0.16 1.020±0.18 36.135±0.82 N/A 3.279±1.09 7.620±1.09 N/A 3.670±0.41 5.408±3.46 13.101±0.63 N/A 6.433±2.95 11.154±5.17 0.196±0.08
ENSMUST00000097650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.128±2.07 N/A N/A N/A
ENSMUST00000185531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.133±2.84 N/A N/A N/A
ENSMUST00000186762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187532 N/A N/A N/A 39.396±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188094 N/A N/A N/A N/A N/A N/A 3.388±0.00 N/A N/A N/A N/A 7.105±5.06 N/A 0.240±0.21
ENSMUST00000188708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189505 4.172±0.00 3.739±0.65 N/A 5.020±0.00 N/A N/A N/A N/A N/A N/A N/A 6.479±1.82 N/A 0.286±0.00
ENSMUST00000189617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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