C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: H1 histone family, member O, oocyte-specific
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000178804 H1FOO 9606 + 3:129543214-129551467 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000324382 H1FOO-001 129543214-129551361 protein_coding
  ENST00000503977 H1FOO-002 129548386-129551467 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryTestisENST00000324382ENST00000503977
Transcript ID Brain Ovary Testis
ENST00000324382 N/A 0.034±0.00 N/A
ENST00000503977 0.033±0.00 0.038±0.00 1.971±1.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030W CIL_00030W_0001 CGP 3:129528640-129551467
CIL_000314 CIL_000314_0001 CGP 3:129543214-129606818

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0001674 IEA female germ cell nucleus
GO:0003677 IEA DNA binding
GO:0005634 ISS:IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006334 IEA nucleosome assembly
GO:0016584 ISS nucleosome positioning
GO:0031492 ISS nucleosomal DNA binding
GO:0044030 ISS regulation of DNA methylation
GO:0051321 IEA meiotic cell cycle
GO:0070062 IDA extracellular vesicular exosome
GO:2000737 ISS negative regulation of stem cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040344 h1m linker histone H1M protein_coding Danio_rerio
ENSMUSG00000042279 H1foo H1 histone family, member O, oocyte-specific protein_coding Mus_musculus

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