C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proteasome (prosome, macropain) assembly chaperone 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000180822 PSMG4 9606 + 6:3231403-3303373 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000324987 PSMG4-005 3258977-3267920 nonsense_mediated_decay
  ENST00000380305 PSMG4-002 3258897-3267779 protein_coding
  ENST00000380306 PSMG4-001 3231807-3267781 protein_coding
  ENST00000416079 PSMG4-009 3231829-3237865 processed_transcript
  ENST00000419065 PSMG4-006 3258952-3267781 protein_coding
  ENST00000438998 PSMG4-004 3258894-3268049 protein_coding
  ENST00000451246 PSMG4-008 3258984-3303373 protein_coding
  ENST00000454610 PSMG4-007 3259060-3291984 protein_coding
  ENST00000473000 PSMG4-003 3258961-3268050 protein_coding
  ENST00000509933 PSMG4-010 3231403-3270835 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000419065ENST00000438998ENST00000473000
Transcript ID Adrenal Bladder Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000419065 N/A N/A N/A N/A N/A N/A N/A 10.468±0.00 N/A N/A N/A
ENST00000438998 7.295±0.00 N/A N/A N/A 3.663±0.00 3.254±0.00 N/A 5.246±0.81 9.292±0.19 11.064±2.59 9.310±0.69
ENST00000473000 1.180±0.00 0.636±0.00 1.458±0.00 0.392±0.00 N/A 0.703±0.00 0.961±0.00 N/A 1.073±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081I CIL_00081I_0001 VISTA 6:2946622-3549686
CIL_000823 CIL_000823_0001 VISTA 6:3049163-3652023
CIL_0003IU CIL_0003IU_0001 CGP 6:3153669-3231730
CIL_0003IV CIL_0003IV_0001 CGP 6:3224261-3303373
CIL_00015Z CIL_00015Z_0002 CGP 6:3231403-3457022

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090191 PSMG4 proteasome (prosome, macropain) assembly chaperone 4 protein_coding Danio_rerio
ENSMUSG00000071451 Psmg4 proteasome (prosome, macropain) assembly chaperone 4 protein_coding Mus_musculus

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