C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003IU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137267-ENSG00000137285 CGP 9606 6:3153669-3231730
GeneTranscriptPositionBiotype
ENSG00000137267 (TUBB2A)
tubulin, beta 2A class IIa 		ENST00000333628 (TUBB2A-001) 3153669-3157526 protein_coding
ENST00000489942 (TUBB2A-002) 3154579-3157526 processed_transcript
ENSG00000137285 (TUBB2B)
tubulin, beta 2B class IIb 		ENST00000259818 (TUBB2B-001) 3224261-3227735 protein_coding
ENST00000473006 (TUBB2B-002) 3224283-3231730 processed_transcript
ENSG00000216819 (TUBB2BP1)
tubulin, beta 2B class IIb pseudogene 1 		ENST00000404155 (TUBB2BP1-001) 3177044-3179764 unprocessed_pseudogene
ENSG00000230269 (RP1-40E16.9)
 ENST00000425384 (RP1-40E16.9-002) 3182744-3195747 lincRNA
ENST00000435043 (RP1-40E16.9-001) 3182744-3195756 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0003IU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000058672-ENSMUSG00000045136 CGP 10090 13:34074301-34130354
GeneTranscriptPositionBiotype
ENSMUSG00000045136 (Tubb2b)
tubulin, beta 2B class IIB 		ENSMUST00000075774 (Tubb2b-201) 34127008-34130354 protein_coding
ENSMUSG00000058672 (Tubb2a)
tubulin, beta 2A class IIA 		ENSMUST00000056427 (Tubb2a-201) 34074301-34078008 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003IU_0001ENSG00000137267ENST00000333628ENST00000489942ENSG00000137285ENST00000259818ENST00000473006ENSG00000216819ENST00000404155ENSG00000230269ENST00000425384ENST00000435043CIL_0003IU_0002ENSMUSG00000045136ENSMUST00000075774ENSMUSG00000058672ENSMUST00000056427
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003IU_0001ENSG00000137267ENST00000333628ENST00000489942ENSG00000137285ENST00000259818ENST00000473006ENSG00000216819ENST00000404155ENSG00000230269ENST00000425384ENST00000435043CIL_0003IU_0002ENSMUSG00000045136ENSMUST00000075774ENSMUSG00000058672ENSMUST00000056427
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137267 ENST00000333628 6.063±0.00 3.618±0.00 0.793±0.00 71.496±22.80 17.249±15.51 4.159±3.68 1.821±1.41 9.690±5.83 5.495±4.41 2.834±2.54 1.824±0.85 5.639±3.46 26.138±8.76 2.968±2.09
ENST00000489942 N/A N/A 0.278±0.00 N/A 0.390±0.00 0.543±0.00 N/A N/A 2.007±0.00 N/A N/A N/A N/A N/A
ENSG00000137285 ENST00000259818 N/A N/A 1.594±0.00 72.656±33.17 4.670±0.00 6.955±0.00 N/A 9.045±0.00 N/A N/A N/A 8.395±0.00 N/A 4.785±0.00
ENST00000473006 N/A N/A N/A N/A N/A N/A 0.391±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000216819 ENST00000404155 0.052±0.00 0.028±0.00 N/A 0.467±0.00 0.031±0.00 N/A N/A 0.052±0.02 0.052±0.00 N/A 0.049±0.00 0.142±0.11 0.145±0.00 0.132±0.00
ENSG00000230269 ENST00000425384 N/A N/A N/A N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A 0.022±0.00 0.135±0.06 0.313±0.08
ENST00000435043 N/A N/A N/A 0.180±0.01 N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045136 ENSMUST00000075774 9.440±5.43 1.078±0.50 8.612±3.22 17.442±0.00 6.876±1.21 6.703±0.70 2.244±0.11 10.358±0.45 3.234±5.25 6.400±1.08 0.604±0.24 11.817±5.13 5.959±4.93 0.394±0.35
ENSMUSG00000058672 ENSMUST00000056427 69.933±9.61 16.006±2.78 57.639±7.81 113.522±0.00 42.434±3.75 35.799±3.29 25.444±0.88 36.091±2.07 109.168±46.58 75.254±14.57 3.897±0.44 54.235±20.89 26.210±13.51 4.724±1.66

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