C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat containing 57
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000180979 LRRC57 9606 - 15:42537820-42548802 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000323443 LRRC57-001 42537820-42548802 protein_coding
  ENST00000397130 LRRC57-002 42542522-42548773 protein_coding
  ENST00000562868 LRRC57-006 42543967-42545449 retained_intron
  ENST00000563454 LRRC57-003 42542524-42548772 protein_coding
  ENST00000569830 LRRC57-004 42544043-42548793 retained_intron
  ENST00000570160 LRRC57-005 42547308-42548793 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLungOvaryENST00000323443ENST00000397130
Transcript ID Adipose Bladder Breast Colon Heart Kidney Lung Ovary
ENST00000323443 1.775±0.00 N/A 1.622±0.00 N/A 1.519±0.00 1.589±0.79 1.865±0.00 2.622±1.20
ENST00000397130 N/A 1.727±0.00 N/A 3.604±0.00 N/A N/A N/A 3.922±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PK CIL_0005PK_0001 CGP 15:42412823-42545356
CIL_0005PJ CIL_0005PJ_0001 CGP 15:42491233-42548802
CIL_0005PI CIL_0005PI_0001 CGP 15:42537820-42569994

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043938 lrrc57 leucine rich repeat containing 57 protein_coding Danio_rerio
ENSMUSG00000027286 Lrrc57 leucine rich repeat containing 57 protein_coding Mus_musculus

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