C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 57
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397130 LRRC57-002 ENSG00000180979 9606 - 15:42542522-42548773 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonOvaryENST00000397130
Transcript ID Bladder Colon Ovary
ENST00000397130 1.727±0.00 3.604±0.00 3.922±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PK CIL_0005PK_0001 CGP 15:42412823-42545356
CIL_0005PJ CIL_0005PJ_0001 CGP 15:42491233-42548802
CIL_0005PI CIL_0005PI_0001 CGP 15:42537820-42569994

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102497 Lrrc57-002 protein_coding Mus_musculus 0 937
ENSMUST00000102499 Lrrc57-003 protein_coding Mus_musculus 0 935
ENSMUST00000102496 Lrrc57-004 protein_coding Mus_musculus 0 935
ENSMUST00000102498 Lrrc57-001 protein_coding Mus_musculus 0 924
ENSMUST00000133612 Lrrc57-005 protein_coding Mus_musculus 0 867
ENSMUST00000141932 Lrrc57-006 retained_intron Mus_musculus 5e-34 150

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