C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005PI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000180979-ENSG00000137814 CGP 9606 15:42537820-42569994
GeneTranscriptPositionBiotype
ENSG00000092531 (SNAP23)
synaptosomal-associated protein, 23kDa 		ENST00000249647 (SNAP23-001) 42495260-42533061 protein_coding
ENST00000349777 (SNAP23-201) 42495306-42533059 protein_coding
ENST00000397138 (SNAP23-002) 42511847-42531478 protein_coding
ENST00000561526 (SNAP23-003) 42491244-42528370 protein_coding
ENST00000563333 (SNAP23-016) 42527943-42531651 retained_intron
ENST00000563451 (SNAP23-011) 42495651-42512364 retained_intron
ENST00000563765 (SNAP23-006) 42492871-42531545 nonsense_mediated_decay
ENST00000563830 (SNAP23-017) 42515237-42545356 protein_coding
ENST00000563873 (SNAP23-019) 42513410-42545347 protein_coding
ENST00000564153 (SNAP23-008) 42495634-42531827 protein_coding
ENST00000566035 (SNAP23-014) 42495678-42529820 nonsense_mediated_decay
ENST00000566141 (SNAP23-010) 42495634-42505688 processed_transcript
ENST00000566327 (SNAP23-009) 42495644-42529804 protein_coding
ENST00000567094 (SNAP23-015) 42495642-42522095 protein_coding
ENST00000568227 (SNAP23-004) 42491299-42513125 retained_intron
ENST00000568331 (SNAP23-020) 42495644-42528373 nonsense_mediated_decay
ENST00000568451 (SNAP23-005) 42492842-42528343 nonsense_mediated_decay
ENST00000568514 (SNAP23-013) 42511833-42531444 retained_intron
ENST00000568745 (SNAP23-021) 42491233-42513442 retained_intron
ENST00000568841 (SNAP23-018) 42515237-42545345 protein_coding
ENST00000568859 (SNAP23-012) 42495709-42528323 protein_coding
ENSG00000137814 (HAUS2)
HAUS augmin-like complex, subunit 2 		ENST00000260372 (HAUS2-001) 42548810-42569994 protein_coding
ENST00000391623 (HAUS2-003) 42548838-42568930 nonsense_mediated_decay
ENST00000562398 (HAUS2-005) 42548838-42563815 protein_coding
ENST00000563479 (HAUS2-009) 42548838-42566733 nonsense_mediated_decay
ENST00000564279 (HAUS2-004) 42548858-42566630 nonsense_mediated_decay
ENST00000567640 (HAUS2-006) 42548828-42566636 nonsense_mediated_decay
ENST00000568846 (HAUS2-007) 42548834-42561687 protein_coding
ENST00000568876 (HAUS2-002) 42548828-42567858 protein_coding
ENST00000570178 (HAUS2-010) 42548867-42567096 nonsense_mediated_decay
ENST00000607467 (HAUS2-011) 42559384-42561687 protein_coding
ENSG00000180979 (LRRC57)
leucine rich repeat containing 57 		ENST00000323443 (LRRC57-001) 42537820-42548802 protein_coding
ENST00000397130 (LRRC57-002) 42542522-42548773 protein_coding
ENST00000562868 (LRRC57-006) 42543967-42545449 retained_intron
ENST00000563454 (LRRC57-003) 42542524-42548772 protein_coding
ENST00000569830 (LRRC57-004) 42544043-42548793 retained_intron
ENST00000570160 (LRRC57-005) 42547308-42548793 protein_coding
ENSG00000261822 (RP11-265N6.2)
 ENST00000561902 (RP11-265N6.2-001) 42567031-42569994 antisense
ENST00000567089 (RP11-265N6.2-002) 42569298-42569994 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0005PI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027286-ENSMUSG00000027285 CGP 10090 2:120604238-120621560
GeneTranscriptPositionBiotype
ENSMUSG00000027285 (Haus2)
HAUS augmin-like complex, subunit 2 		ENSMUST00000028741 (Haus2-003) 120609383-120619906 nonsense_mediated_decay
ENSMUST00000110706 (Haus2-002) 120609595-120621560 protein_coding
ENSMUST00000124187 (Haus2-001) 120609383-120621560 protein_coding
ENSMUSG00000027286 (Lrrc57)
leucine rich repeat containing 57 		ENSMUST00000102496 (Lrrc57-004) 120604238-120609315 protein_coding
ENSMUST00000102497 (Lrrc57-002) 120604238-120609355 protein_coding
ENSMUST00000102498 (Lrrc57-001) 120604238-120609510 protein_coding
ENSMUST00000102499 (Lrrc57-003) 120604238-120609520 protein_coding
ENSMUST00000133612 (Lrrc57-005) 120605970-120609508 protein_coding
ENSMUST00000135465 (Lrrc57-007) 120604819-120607972 protein_coding
ENSMUST00000141932 (Lrrc57-006) 120608818-120609302 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005PI_0001ENSG00000092531ENST00000249647ENST00000349777ENST00000397138ENST00000563333ENST00000563765ENST00000563830ENST00000564153ENST00000566327ENST00000568514ENSG00000137814ENST00000260372ENST00000391623ENST00000562398ENST00000563479ENST00000567640ENST00000568876ENSG00000180979ENST00000323443ENST00000397130ENSG00000261822ENST00000561902ENST00000567089CIL_0005PI_0002ENSMUSG00000027285ENSMUST00000028741ENSMUST00000110706ENSMUST00000124187ENSMUSG00000027286ENSMUST00000102496ENSMUST00000102497ENSMUST00000102498ENSMUST00000102499ENSMUST00000133612ENSMUST00000135465
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000092531 ENST00000249647 N/A N/A 1.575±0.00 1.507±0.00 4.762±0.00 4.492±0.00 1.645±0.00 2.132±0.00 4.437±0.00 5.058±0.00 0.400±0.00 5.394±2.10 15.599±2.52 5.682±0.97
ENST00000349777 5.176±0.00 8.018±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000397138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.301±0.00 30.806±0.00 N/A
ENST00000561526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563333 N/A N/A N/A 3.597±0.00 N/A N/A 2.460±0.00 10.189±0.00 3.933±0.00 N/A 1.107±0.00 6.551±0.00 N/A N/A
ENST00000563451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.466±0.00
ENST00000563830 N/A N/A N/A N/A 16.273±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564153 17.034±0.00 N/A N/A N/A 17.545±0.00 15.086±0.00 11.428±0.00 N/A N/A 19.643±0.00 2.143±0.00 N/A N/A 14.814±0.00
ENST00000566035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566327 25.064±0.00 N/A N/A N/A N/A 23.615±0.00 N/A N/A N/A N/A N/A 18.335±0.00 56.672±0.00 24.556±2.63
ENST00000567094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568514 N/A N/A 4.056±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 6.567±0.00 N/A N/A
ENST00000568745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000137814 ENST00000260372 N/A N/A 0.469±0.00 2.458±1.45 N/A 0.755±0.00 0.481±0.00 0.154±0.00 1.445±0.73 N/A 0.257±0.00 2.737±1.62 1.952±0.70 2.108±0.13
ENST00000391623 2.257±0.00 N/A 0.146±0.00 6.728±0.00 0.381±0.00 1.754±0.00 1.076±0.44 1.687±0.00 N/A N/A 1.844±0.00 1.542±0.25 1.093±0.04 3.256±0.00
ENST00000562398 N/A N/A N/A N/A N/A 1.485±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.157±0.00 4.340±0.00 8.119±0.00
ENST00000564279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.833±0.00 N/A N/A N/A
ENST00000568846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568876 N/A N/A 0.277±0.00 1.041±0.00 N/A N/A N/A N/A 1.246±0.00 1.162±0.00 N/A N/A N/A N/A
ENST00000570178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000180979 ENST00000323443 1.775±0.00 N/A N/A N/A 1.622±0.00 N/A 1.519±0.00 1.589±0.79 N/A 1.865±0.00 N/A 2.622±1.20 N/A N/A
ENST00000397130 N/A N/A 1.727±0.00 N/A N/A 3.604±0.00 N/A N/A N/A N/A N/A 3.922±0.00 N/A N/A
ENST00000562868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000261822 ENST00000561902 N/A N/A N/A N/A N/A 2.195±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567089 N/A 4.037±0.00 N/A N/A 6.115±0.00 N/A 2.247±0.00 3.421±0.00 N/A 2.024±0.91 N/A 3.451±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027285 ENSMUST00000028741 N/A 1.750±0.00 N/A N/A N/A 0.934±0.00 N/A N/A 1.420±0.22 N/A N/A 1.609±0.30 3.661±0.00 N/A
ENSMUST00000110706 N/A 1.672±0.41 N/A N/A 3.702±1.17 0.825±0.00 N/A N/A 0.772±0.19 N/A 1.300±0.00 2.716±1.25 3.416±1.12 N/A
ENSMUST00000124187 2.748±0.99 N/A 4.627±0.95 6.715±2.98 2.070±0.67 1.478±0.76 2.616±0.70 1.916±0.63 4.323±3.37 3.205±0.69 2.920±0.53 2.488±0.81 4.569±1.61 N/A
ENSMUSG00000027286 ENSMUST00000102496 N/A N/A N/A 7.513±0.00 N/A N/A N/A 1.066±0.06 2.630±0.00 N/A 1.730±0.00 6.034±1.82 6.642±1.34 18.580±0.00
ENSMUST00000102497 2.128±0.46 2.843±0.81 3.789±0.45 6.458±0.48 1.714±0.18 1.625±0.53 1.777±0.44 1.457±0.29 3.571±2.16 2.476±0.63 1.610±0.00 2.369±0.50 5.117±1.66 N/A
ENSMUST00000102498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.479±0.00 N/A N/A 16.910±1.28
ENSMUST00000102499 1.769±0.37 1.273±0.23 4.023±1.02 3.743±0.00 1.490±0.48 N/A 2.339±0.35 1.342±0.39 0.994±0.15 1.807±0.39 2.096±0.23 1.986±0.00 N/A 13.714±0.00
ENSMUST00000133612 3.402±0.60 2.467±0.62 N/A N/A 3.203±2.39 1.884±0.18 2.759±0.31 2.251±0.31 2.057±0.41 2.915±0.18 N/A 2.357±0.61 N/A 81.619±19.68
ENSMUST00000135465 N/A 4.091±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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