C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat containing 57
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027286 Lrrc57 10090 - 2:120604238-120609520 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102496 Lrrc57-004 120604238-120609315 protein_coding
  ENSMUST00000102497 Lrrc57-002 120604238-120609355 protein_coding
  ENSMUST00000102498 Lrrc57-001 120604238-120609510 protein_coding
  ENSMUST00000102499 Lrrc57-003 120604238-120609520 protein_coding
  ENSMUST00000133612 Lrrc57-005 120605970-120609508 protein_coding
  ENSMUST00000135465 Lrrc57-007 120604819-120607972 protein_coding
  ENSMUST00000141932 Lrrc57-006 120608818-120609302 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102496ENSMUST00000102497ENSMUST00000102498ENSMUST00000102499ENSMUST00000133612ENSMUST00000135465
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102496 N/A N/A N/A 7.513±0.00 N/A N/A N/A 1.066±0.06 2.630±0.00 N/A 1.730±0.00 6.034±1.82 6.642±1.34 18.580±0.00
ENSMUST00000102497 2.128±0.46 2.843±0.81 3.789±0.45 6.458±0.48 1.714±0.18 1.625±0.53 1.777±0.44 1.457±0.29 3.571±2.16 2.476±0.63 1.610±0.00 2.369±0.50 5.117±1.66 N/A
ENSMUST00000102498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.479±0.00 N/A N/A 16.910±1.28
ENSMUST00000102499 1.769±0.37 1.273±0.23 4.023±1.02 3.743±0.00 1.490±0.48 N/A 2.339±0.35 1.342±0.39 0.994±0.15 1.807±0.39 2.096±0.23 1.986±0.00 N/A 13.714±0.00
ENSMUST00000133612 3.402±0.60 2.467±0.62 N/A N/A 3.203±2.39 1.884±0.18 2.759±0.31 2.251±0.31 2.057±0.41 2.915±0.18 N/A 2.357±0.61 N/A 81.619±19.68
ENSMUST00000135465 N/A 4.091±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PJ CIL_0005PJ_0002 CGP 2:120567671-120609520
CIL_0005PI CIL_0005PI_0002 CGP 2:120604238-120621560

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043938 lrrc57 leucine rich repeat containing 57 protein_coding Danio_rerio
ENSG00000180979 LRRC57 leucine rich repeat containing 57 protein_coding Homo_sapiens

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