C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 108
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000181378 CCDC108 9606 - 2:219002846-219041527 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295729 CCDC108-002 219033692-219041523 protein_coding
  ENST00000341552 CCDC108-001 219002846-219041523 protein_coding
  ENST00000409865 CCDC108-005 219027063-219041516 protein_coding
  ENST00000410037 CCDC108-004 219027080-219041516 protein_coding
  ENST00000413871 CCDC108-008 219018256-219019704 protein_coding
  ENST00000436631 CCDC108-009 219032568-219041516 protein_coding
  ENST00000441968 CCDC108-201 219026550-219039006 protein_coding
  ENST00000453220 CCDC108-202 219002847-219039057 protein_coding
  ENST00000457968 CCDC108-011 219031106-219041516 protein_coding
  ENST00000458526 CCDC108-010 219035484-219041504 protein_coding
  ENST00000462848 CCDC108-003 219026548-219041527 retained_intron
  ENST00000463683 CCDC108-006 219026647-219039215 retained_intron
  ENST00000474601 CCDC108-007 219026550-219029801 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryTestisENST00000295729ENST00000341552ENST00000410037ENST00000413871ENST00000436631ENST00000453220ENST00000457968ENST00000474601
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Testis
ENST00000295729 N/A N/A N/A N/A N/A 0.008±0.00 N/A N/A N/A N/A
ENST00000341552 N/A N/A N/A N/A N/A N/A N/A N/A 1.962±0.00 0.865±0.00
ENST00000410037 N/A N/A 0.214±0.00 N/A N/A N/A 0.107±0.00 1.533±0.00 0.019±0.00 3.132±0.00
ENST00000413871 N/A N/A N/A N/A 0.044±0.00 N/A N/A N/A 0.152±0.00 N/A
ENST00000436631 N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A N/A N/A
ENST00000453220 0.025±0.00 N/A 0.025±0.00 0.005±0.00 0.004±0.00 N/A 0.031±0.00 0.040±0.00 N/A 0.980±0.00
ENST00000457968 N/A N/A N/A N/A N/A N/A N/A 1.223±0.00 0.047±0.00 N/A
ENST00000474601 N/A 0.009±0.00 0.133±0.00 0.033±0.00 N/A N/A N/A N/A 0.063±0.00 4.110±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ED CIL_0006ED_0001 CGP 2:218990189-219041527
CIL_0006EC CIL_0006EC_0001 CGP 2:219002846-219060467

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0016021 IEA integral component of membrane
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006863 CCDC108 coiled-coil domain containing 108 protein_coding Danio_rerio
ENSMUSG00000047021 Ccdc108 coiled-coil domain containing 108 protein_coding Mus_musculus

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