C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 108
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000453220 CCDC108-202 ENSG00000181378 9606 - 2:219002847-219039057 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLungTestisENST00000453220
Transcript ID Adipose Brain Breast Colon Kidney Lung Testis
ENST00000453220 0.025±0.00 0.025±0.00 0.005±0.00 0.004±0.00 0.031±0.00 0.040±0.00 0.980±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ED CIL_0006ED_0001 CGP 2:218990189-219041527
CIL_0006EC CIL_0006EC_0001 CGP 2:219002846-219060467

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0016021 IEA integral component of membrane
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094844 Ccdc108-001 protein_coding Mus_musculus 0 3620
ENSMUST00000139950 Ccdc108-002 retained_intron Mus_musculus 0 1264
ENSMUST00000130489 Ccdc108-003 retained_intron Mus_musculus 0 894

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