C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006EC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000181378-ENSG00000163501 CGP 9606 2:219002846-219060467
GeneTranscriptPositionBiotype
ENSG00000163501 (IHH)
indian hedgehog 		ENST00000295731 (IHH-001) 219054420-219060467 protein_coding
ENSG00000181378 (CCDC108)
coiled-coil domain containing 108 		ENST00000295729 (CCDC108-002) 219033692-219041523 protein_coding
ENST00000341552 (CCDC108-001) 219002846-219041523 protein_coding
ENST00000409865 (CCDC108-005) 219027063-219041516 protein_coding
ENST00000410037 (CCDC108-004) 219027080-219041516 protein_coding
ENST00000413871 (CCDC108-008) 219018256-219019704 protein_coding
ENST00000436631 (CCDC108-009) 219032568-219041516 protein_coding
ENST00000441968 (CCDC108-201) 219026550-219039006 protein_coding
ENST00000453220 (CCDC108-202) 219002847-219039057 protein_coding
ENST00000457968 (CCDC108-011) 219031106-219041516 protein_coding
ENST00000458526 (CCDC108-010) 219035484-219041504 protein_coding
ENST00000462848 (CCDC108-003) 219026548-219041527 retained_intron
ENST00000463683 (CCDC108-006) 219026647-219039215 retained_intron
ENST00000474601 (CCDC108-007) 219026550-219029801 retained_intron
ENSG00000224090 (AC097468.4)
 ENST00000441450 (AC097468.4-001) 219002215-219015721 antisense
CIL_0006EC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047021-ENSMUSG00000006538 CGP 10090 1:74902071-74951672
GeneTranscriptPositionBiotype
ENSMUSG00000006538 (Ihh)
Indian hedgehog 		ENSMUST00000164097 (Ihh-001) 74945315-74951672 protein_coding
ENSMUST00000189364 (Ihh-002) 74947724-74951442 retained_intron
ENSMUSG00000047021 (Ccdc108)
coiled-coil domain containing 108 		ENSMUST00000094844 (Ccdc108-001) 74902071-74935599 protein_coding
ENSMUST00000130489 (Ccdc108-003) 74923392-74935592 retained_intron
ENSMUST00000139950 (Ccdc108-002) 74922303-74935594 retained_intron
ENSMUSG00000089653 (Gm15841)
predicted gene 15841 		ENSMUST00000160540 (Gm15841-001) 74902371-74907653 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006EC_0001ENSG00000163501ENST00000295731ENSG00000181378ENST00000295729ENST00000341552ENST00000409865ENST00000410037ENST00000413871ENST00000436631ENST00000441968ENST00000453220ENST00000457968ENST00000458526ENST00000462848ENST00000463683ENST00000474601ENSG00000224090ENST00000441450CIL_0006EC_0002ENSMUSG00000006538ENSMUST00000164097ENSMUST00000189364ENSMUSG00000047021ENSMUST00000094844ENSMUST00000130489ENSMUST00000139950ENSMUSG00000089653ENSMUST00000160540
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006EC_0001ENSG00000163501ENST00000295731ENSG00000181378ENST00000295729ENST00000341552ENST00000410037ENST00000413871ENST00000436631ENST00000453220ENST00000457968ENST00000474601ENSG00000224090ENST00000441450CIL_0006EC_0002ENSMUSG00000006538ENSMUST00000164097ENSMUST00000189364ENSMUSG00000047021ENSMUST00000094844ENSMUST00000130489ENSMUST00000139950ENSMUSG00000089653ENSMUST00000160540
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163501 ENST00000295731 N/A 0.015±0.00 0.267±0.00 0.096±0.00 0.017±0.00 4.620±2.72 N/A 1.371±1.06 0.283±0.00 1.024±0.00 N/A 2.353±2.51 0.065±0.04 0.366±0.20
ENSG00000181378 ENST00000295729 N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000341552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.962±0.00 N/A 0.865±0.00
ENST00000409865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000410037 N/A N/A N/A 0.214±0.00 N/A N/A N/A 0.107±0.00 N/A 1.533±0.00 N/A 0.019±0.00 N/A 3.132±0.00
ENST00000413871 N/A N/A N/A N/A N/A 0.044±0.00 N/A N/A N/A N/A N/A 0.152±0.00 N/A N/A
ENST00000436631 N/A N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453220 0.025±0.00 N/A N/A 0.025±0.00 0.005±0.00 0.004±0.00 N/A 0.031±0.00 N/A 0.040±0.00 N/A N/A N/A 0.980±0.00
ENST00000457968 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.223±0.00 N/A 0.047±0.00 N/A N/A
ENST00000458526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474601 N/A 0.009±0.00 N/A 0.133±0.00 0.033±0.00 N/A N/A N/A N/A N/A N/A 0.063±0.00 N/A 4.110±0.00
ENSG00000224090 ENST00000441450 N/A N/A N/A N/A 0.012±0.00 0.072±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006538 ENSMUST00000164097 6.166±6.10 0.077±0.05 0.084±0.00 0.164±0.04 0.066±0.03 59.281±6.59 0.045±0.03 13.796±3.69 1.630±1.32 0.267±0.13 0.058±0.03 31.876±12.96 2.259±1.97 0.206±0.15
ENSMUST00000189364 N/A 0.022±0.00 N/A N/A 0.036±0.00 N/A N/A N/A 0.797±0.80 N/A 0.076±0.00 12.230±4.24 1.750±1.52 N/A
ENSMUSG00000047021 ENSMUST00000094844 0.007±0.00 N/A N/A 0.615±0.11 N/A 0.050±0.02 0.137±0.13 N/A 0.004±0.00 3.467±0.00 N/A 3.387±1.23 0.006±0.00 37.817±8.50
ENSMUST00000130489 N/A 0.048±0.01 0.007±0.00 0.142±0.00 0.007±0.00 0.055±0.02 N/A N/A 0.011±0.00 N/A N/A N/A 0.002±0.00 N/A
ENSMUST00000139950 N/A N/A N/A 0.176±0.01 N/A N/A 0.018±0.00 N/A 0.003±0.00 4.423±0.00 N/A N/A 0.029±0.00 N/A
ENSMUSG00000089653 ENSMUST00000160540 N/A 0.159±0.00 N/A N/A N/A 0.483±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

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