C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 108
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047021 Ccdc108 10090 - 1:74902071-74935599 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000094844 Ccdc108-001 74902071-74935599 protein_coding
  ENSMUST00000130489 Ccdc108-003 74923392-74935592 retained_intron
  ENSMUST00000139950 Ccdc108-002 74922303-74935594 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungOvaryPlacentaTestisENSMUST00000094844ENSMUST00000130489ENSMUST00000139950
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENSMUST00000094844 0.007±0.00 N/A N/A 0.615±0.11 N/A 0.050±0.02 0.137±0.13 0.004±0.00 3.467±0.00 3.387±1.23 0.006±0.00 37.817±8.50
ENSMUST00000130489 N/A 0.048±0.01 0.007±0.00 0.142±0.00 0.007±0.00 0.055±0.02 N/A 0.011±0.00 N/A N/A 0.002±0.00 N/A
ENSMUST00000139950 N/A N/A N/A 0.176±0.01 N/A N/A 0.018±0.00 0.003±0.00 4.423±0.00 N/A 0.029±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ED CIL_0006ED_0002 CGP 1:74889934-74935599
CIL_0006EC CIL_0006EC_0002 CGP 1:74902071-74951672

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006863 CCDC108 coiled-coil domain containing 108 protein_coding Danio_rerio
ENSG00000181378 CCDC108 coiled-coil domain containing 108 protein_coding Homo_sapiens

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