C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein S23
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000181610 MRPS23 9606 - 17:57834781-57850056 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000313608 MRPS23-001 57834781-57850056 protein_coding
  ENST00000578444 MRPS23-004 57840800-57850044 protein_coding
  ENST00000579380 MRPS23-003 57841004-57850056 protein_coding
  ENST00000579768 MRPS23-002 57848736-57849997 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000313608ENST00000578444ENST00000579380
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000313608 1.843±0.00 2.835±0.00 0.571±0.00 5.437±1.97 2.872±0.00 1.385±0.83 3.221±2.30 3.736±2.84 1.364±0.14 1.047±0.12 1.472±0.71 2.661±1.60 2.175±0.16 3.370±0.77
ENST00000578444 8.020±0.00 13.365±0.00 6.256±0.00 14.064±1.57 7.055±1.23 7.228±0.00 22.401±9.75 12.022±9.71 7.735±1.60 4.862±1.48 12.251±1.22 16.360±3.82 14.456±3.25 20.500±3.48
ENST00000579380 N/A N/A N/A N/A N/A 9.343±0.00 N/A N/A N/A N/A 7.326±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R8 CIL_0007R8_0001 VISTA 17:57241317-57842812
CIL_0007PL CIL_0007PL_0001 UCNEbase 17:57406597-58005077
CIL_0009DM CIL_0009DM_0001 VISTA 17:57461902-58063720
CIL_0009DL CIL_0009DL_0001 VISTA 17:57574410-58175690

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005739 IDA mitochondrion
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0031965 IDA nuclear membrane
GO:0044822 IDA poly(A) RNA binding
GO:0045111 IDA intermediate filament cytoskeleton

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033973 mrps23 mitochondrial ribosomal protein S23 protein_coding Danio_rerio
ENSMUSG00000023723 Mrps23 mitochondrial ribosomal protein S23 protein_coding Mus_musculus

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