C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein S23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000578444 MRPS23-004 ENSG00000181610 9606 - 17:57840800-57850044 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000578444
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000578444 8.020±0.00 13.365±0.00 6.256±0.00 14.064±1.57 7.055±1.23 7.228±0.00 22.401±9.75 12.022±9.71 7.735±1.60 4.862±1.48 12.251±1.22 16.360±3.82 14.456±3.25 20.500±3.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R8 CIL_0007R8_0001 VISTA 17:57241317-57842812
CIL_0007PL CIL_0007PL_0001 UCNEbase 17:57406597-58005077
CIL_0009DM CIL_0009DM_0001 VISTA 17:57461902-58063720
CIL_0009DL CIL_0009DL_0001 VISTA 17:57574410-58175690

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183742 MRPS23-201 protein_coding Mus_musculus 0 433
ENSMUST00000024486 Mrps23-001 protein_coding Mus_musculus 0 433
ENSMUST00000118784 Mrps23-002 protein_coding Mus_musculus 0 396
ENSMUST00000139170 Mrps23-003 protein_coding Mus_musculus 0 392
ENSMUST00000144070 Mrps23-004 protein_coding Mus_musculus 0 248

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