Source ID |
Type |
Tax ID |
Position |
MSI2 |
UCNEbase |
7955 |
21:38404226-38405181 |
Gene | Transcript | Position | Biotype |
Notice (8): Undefined index: CIL_0007PL_0006 [APP/View/Region/show.ctp, line 46]Code Context
<tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
<?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
'region_arr' => array(
'CIL_0007PL_0001' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007PL_0002' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007PL_0003' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007PL_0005' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
)
),
'gene_desc_arr' => array(
'ENSG00000136450' => 'serine/arginine-rich splicing factor 1',
'ENSG00000136451' => 'vascular endothelial zinc finger 1',
'ENSG00000153944' => 'musashi RNA-binding protein 2',
'ENSG00000166329' => 'coiled-coil domain containing 182',
'ENSG00000180891' => 'CUE domain containing 1',
'ENSG00000181610' => 'mitochondrial ribosomal protein S23',
'ENSG00000222976' => 'RNA, 7SK small nuclear pseudogene 94',
'ENSG00000238447' => 'RNA, U7 small nuclear 134 pseudogene',
'ENSG00000242889' => 'RNA, 7SL, cytoplasmic 449, pseudogene',
'ENSG00000263499' => null,
'ENSG00000264112' => null,
'ENSG00000264914' => null,
'ENSG00000265542' => null,
'ENSG00000266086' => 'Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000463235}',
'ENSG00000266100' => null,
'ENSG00000278285' => null,
'ENSG00000278642' => null,
'ENSG00000279281' => null,
'ENSG00000280028' => null,
'ENSG00000280233' => null,
'ENSMUSG00000018377' => 'vascular endothelial zinc finger 1',
'ENSMUSG00000018378' => 'CUE domain containing 1',
'ENSMUSG00000018379' => 'serine/arginine-rich splicing factor 1',
'ENSMUSG00000023723' => 'mitochondrial ribosomal protein S23',
'ENSMUSG00000034031' => 'RIKEN cDNA 1700106J16 gene',
'ENSMUSG00000069769' => 'musashi RNA-binding protein 2',
'ENSMUSG00000081304' => 'predicted gene 11509',
'ENSMUSG00000084411' => 'predicted gene 11510',
'ENSMUSG00000085246' => 'predicted gene 15893',
'ENSMUSG00000087373' => 'predicted gene 15892',
'ENSMUSG00000092985' => 'microRNA 378b',
'ENSDARG00000008247' => 'vascular endothelial zinc finger 1a',
'ENSDARG00000006062' => 'A kinase (PRKA) anchor protein 1b',
'ENSDARG00000012982' => 'neurofibromin 1a',
'ENSDARG00000021343' => 'WD repeat and SOCS box-containing 1',
'ENSDARG00000025903' => 'lectin, galactoside-binding, soluble, 9 (galectin 9)-like 1',
'ENSDARG00000030025' => 'si:ch211-237d5.4',
'ENSDARG00000030933' => 'kinase suppressor of ras 1',
'ENSDARG00000032614' => 'musashi homolog 2b (Drosophila)',
'ENSDARG00000041060' => 'zgc:92326',
'ENSDARG00000054748' => 'CUE domain containing 1b',
'ENSDARG00000069058' => 'zgc:136924',
'ENSDARG00000087311' => 'zgc:171951',
'ENSDARG00000089444' => 'oligodendrocyte myelin glycoprotein b',
'ENSDARG00000093059' => 'si:ch211-209m20.9',
'ENSDARG00000097413' => 'si:ch211-237d5.5',
'ENSDARG00000097767' => 'si:ch211-209m20.6',
'ENSDARG00000098011' => 'si:ch211-209m20.7'
),
'gene_name_arr' => array(
'ENSG00000136450' => 'SRSF1',
'ENSG00000136451' => 'VEZF1',
'ENSG00000153944' => 'MSI2',
'ENSG00000166329' => 'CCDC182',
'ENSG00000180891' => 'CUEDC1',
'ENSG00000181610' => 'MRPS23',
'ENSG00000222976' => 'RN7SKP94',
'ENSG00000238447' => 'RNU7-134P',
'ENSG00000242889' => 'RN7SL449P',
'ENSG00000263499' => 'RP11-118E18.4',
'ENSG00000264112' => 'RP11-159D12.2',
'ENSG00000264914' => 'RP11-343K8.3',
'ENSG00000265542' => 'RP11-60A24.3',
'ENSG00000266086' => 'RP11-159D12.5',
'ENSG00000266100' => 'RP11-118E18.2',
'ENSG00000278285' => 'AC015883.1',
'ENSG00000278642' => 'RP11-159D12.11',
'ENSG00000279281' => 'RP11-226M10.3',
'ENSG00000280028' => 'RP11-118E18.1',
'ENSG00000280233' => 'RP11-159D12.3',
'ENSMUSG00000018377' => 'Vezf1',
'ENSMUSG00000018378' => 'Cuedc1',
'ENSMUSG00000018379' => 'Srsf1',
'ENSMUSG00000023723' => 'Mrps23',
'ENSMUSG00000034031' => '1700106J16Rik',
'ENSMUSG00000069769' => 'Msi2',
'ENSMUSG00000081304' => 'Gm11509',
'ENSMUSG00000084411' => 'Gm11510',
'ENSMUSG00000085246' => 'Gm15893',
'ENSMUSG00000087373' => 'Gm15892',
'ENSMUSG00000092985' => 'Mir378b',
'ENSDARG00000008247' => 'vezf1a',
'ENSDARG00000006062' => 'akap1b',
'ENSDARG00000012982' => 'nf1a',
'ENSDARG00000021343' => 'wsb1',
'ENSDARG00000025903' => 'lgals9l1',
'ENSDARG00000030025' => 'si:ch211-237d5.4',
'ENSDARG00000030933' => 'KSR1 (1 of 2)',
'ENSDARG00000032614' => 'msi2b',
'ENSDARG00000041060' => 'zgc:92326',
'ENSDARG00000054748' => 'cuedc1b',
'ENSDARG00000069058' => 'zgc:136924',
'ENSDARG00000087311' => 'zgc:171951',
'ENSDARG00000089444' => 'ogmb',
'ENSDARG00000093059' => 'si:ch211-209m20.9',
'ENSDARG00000097413' => 'si:ch211-237d5.5',
'ENSDARG00000097767' => 'si:ch211-209m20.6',
'ENSDARG00000098011' => 'si:ch211-209m20.7'
),
'accession_table' => array(
(int) 0 => array(
'region_elements' => array(
[maximum depth reached]
)
),
(int) 1 => array(
'region_elements' => array(
[maximum depth reached]
)
),
(int) 2 => array(
'region_elements' => array(
[maximum depth reached]
)
),
(int) 3 => array(
'region_elements' => array(
[maximum depth reached]
)
),
(int) 4 => array(
'region_elements' => array(
[maximum depth reached]
)
),
(int) 5 => array(
'region_elements' => array(
[maximum depth reached]
)
)
),
'all_tissues' => array(
(int) 0 => 'Adipose',
(int) 27 => 'Adrenal',
(int) 57 => 'Bladder',
(int) 85 => 'Brain',
(int) 138 => 'Breast',
(int) 174 => 'Colon',
(int) 208 => 'Heart',
(int) 263 => 'Kidney',
(int) 319 => 'Liver',
(int) 371 => 'Lung',
(int) 405 => 'Muscle',
(int) 449 => 'Ovary',
(int) 493 => 'Placenta',
(int) 531 => 'Testis'
),
'column_titles' => array(
(int) 0 => 'Region Sub-Accession',
(int) 1 => 'Tax ID',
(int) 2 => 'Position',
(int) 3 => 'Region Length'
),
'geneviewer' => array(
(int) 9606 => array(
'version' => 'GRCh38',
'coord_key' => 'Homo sapiens',
'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
'desc' => 'Gene structures from GENCODE 19',
'twoBitURI' => '/static/files/GRCh38.2bit',
'bwgURI' => '/static/files/GRCh38.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
),
(int) 10090 => array(
'version' => 'GRCm38',
'coord_key' => 'Mus musculus',
'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
'desc' => 'Gene structures from GENCODE 19',
'twoBitURI' => '/static/files/GRCm38.2bit',
'bwgURI' => '/static/files/GRCm38.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
),
(int) 7955 => array(
'version' => 'Zv9',
'coord_key' => 'Danio rerio',
'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
'twoBitURI' => '/static/files/Zv9.2bit',
'bwgURI' => '/static/files/Zv9.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
)
),
'transcript_count' => (int) 153,
'longest_tissue_len' => (int) 8,
'transcript_data' => array(
'ENST00000258962' => array(
'start' => '58004849',
'end' => '58007346',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'SRSF1-001'
),
'ENST00000578430' => array(
'start' => '58006242',
'end' => '58007346',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'SRSF1-007'
),
'ENST00000581497' => array(
'start' => '58003493',
'end' => '58005134',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'SRSF1-009'
),
'ENST00000581979' => array(
'start' => '58003807',
'end' => '58007232',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'SRSF1-004'
),
'ENST00000582730' => array(
'start' => '58003360',
'end' => '58007261',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'SRSF1-003'
),
'ENST00000583741' => array(
'start' => '58004849',
'end' => '58007261',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'SRSF1-005'
),
'ENST00000584668' => array(
'start' => '58003802',
'end' => '58006405',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'SRSF1-008'
),
'ENST00000584773' => array(
'start' => '58004588',
'end' => '58007261',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'SRSF1-002'
),
'ENST00000585096' => array(
'start' => '58004822',
'end' => '58007273',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'SRSF1-006'
),
'ENST00000258963' => array(
'start' => '57971547',
'end' => '57982864',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'VEZF1-005'
),
'ENST00000581208' => array(
'start' => '57973759',
'end' => '57988152',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'VEZF1-001'
),
'ENST00000583932' => array(
'start' => '57982910',
'end' => '57988259',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'VEZF1-004'
),
'ENST00000584396' => array(
'start' => '57973759',
'end' => '57985348',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'VEZF1-002'
),
'ENST00000284073' => array(
'start' => '57256534',
'end' => '57684685',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MSI2-001'
),
'ENST00000322684' => array(
'start' => '57257013',
'end' => '57632900',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MSI2-003'
),
'ENST00000416426' => array(
'start' => '57255851',
'end' => '57680121',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MSI2-002'
),
'ENST00000442934' => array(
'start' => '57285844',
'end' => '57680297',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MSI2-005'
),
'ENST00000577241' => array(
'start' => '57596903',
'end' => '57616631',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'MSI2-015'
),
'ENST00000579180' => array(
'start' => '57294685',
'end' => '57632905',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MSI2-006'
),
'ENST00000579205' => array(
'start' => '57406812',
'end' => '57627302',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'MSI2-011'
),
'ENST00000579466' => array(
'start' => '57671474',
'end' => '57675056',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'MSI2-017'
),
'ENST00000579483' => array(
'start' => '57262115',
'end' => '57268550',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'MSI2-004'
),
'ENST00000579505' => array(
'start' => '57440690',
'end' => '57675059',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'MSI2-013'
),
'ENST00000579531' => array(
'start' => '57257042',
'end' => '57274433',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'MSI2-019'
),
'ENST00000579590' => array(
'start' => '57257018',
'end' => '57432614',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MSI2-009'
),
'ENST00000581523' => array(
'start' => '57256743',
'end' => '57274489',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'MSI2-018'
),
'ENST00000581776' => array(
'start' => '57256740',
'end' => '57365021',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'MSI2-008'
),
'ENST00000582453' => array(
'start' => '57256774',
'end' => '57565995',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'MSI2-014'
),
'ENST00000582772' => array(
'start' => '57444487',
'end' => '57596950',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'MSI2-012'
),
'ENST00000583705' => array(
'start' => '57625572',
'end' => '57633183',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'MSI2-007'
),
'ENST00000583821' => array(
'start' => '57626915',
'end' => '57631949',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'MSI2-016'
),
'ENST00000584476' => array(
'start' => '57257124',
'end' => '57262433',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'MSI2-010'
),
'ENST00000299415' => array(
'start' => '57744481',
'end' => '57745312',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CCDC182-001'
),
'ENST00000360238' => array(
'start' => '57862976',
'end' => '57903389',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CUEDC1-002'
),
'ENST00000407144' => array(
'start' => '57862696',
'end' => '57892688',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CUEDC1-013'
),
'ENST00000577422' => array(
'start' => '57862875',
'end' => '57867305',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'CUEDC1-010'
),
'ENST00000577497' => array(
'start' => '57862963',
'end' => '57866857',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'CUEDC1-008'
),
'ENST00000577589' => array(
'start' => '57872811',
'end' => '57885837',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CUEDC1-003'
),
'ENST00000577830' => array(
'start' => '57861243',
'end' => '57955323',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CUEDC1-001'
),
'ENST00000577840' => array(
'start' => '57863272',
'end' => '57955257',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CUEDC1-004'
),
'ENST00000578357' => array(
'start' => '57862963',
'end' => '57869938',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'CUEDC1-011'
),
'ENST00000581391' => array(
'start' => '57862875',
'end' => '57868465',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'CUEDC1-006'
),
'ENST00000581898' => array(
'start' => '57862963',
'end' => '57872670',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CUEDC1-005'
),
'ENST00000582951' => array(
'start' => '57862875',
'end' => '57867630',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'CUEDC1-007'
),
'ENST00000584746' => array(
'start' => '57861604',
'end' => '57871365',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'CUEDC1-012'
),
'ENST00000585294' => array(
'start' => '57862976',
'end' => '57867415',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CUEDC1-009'
),
'ENST00000313608' => array(
'start' => '57834781',
'end' => '57850056',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MRPS23-001'
),
'ENST00000578444' => array(
'start' => '57840800',
'end' => '57850044',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MRPS23-004'
),
'ENST00000579380' => array(
'start' => '57841004',
'end' => '57850056',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MRPS23-003'
),
'ENST00000579768' => array(
'start' => '57848736',
'end' => '57849997',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'MRPS23-002'
),
'ENST00000411044' => array(
'start' => '57789449',
'end' => '57789732',
'transcript_biotype' => 'misc_RNA',
'transcript_name' => 'RN7SKP94-201'
),
'ENST00000458997' => array(
'start' => '57685529',
'end' => '57685592',
'transcript_biotype' => 'snRNA',
'transcript_name' => 'RNU7-134P-201'
),
'ENST00000464937' => array(
'start' => '57618108',
'end' => '57618393',
'transcript_biotype' => 'misc_RNA',
'transcript_name' => 'RN7SL449P-201'
),
'ENST00000578662' => array(
'start' => '57600856',
'end' => '57608412',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-118E18.4-001'
),
'ENST00000577267' => array(
'start' => '57989042',
'end' => '57993479',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'RP11-159D12.2-002'
),
'ENST00000582096' => array(
'start' => '57989039',
'end' => '57991521',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'RP11-159D12.2-003'
),
'ENST00000585065' => array(
'start' => '57989044',
'end' => '57994850',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'RP11-159D12.2-001'
),
'ENST00000579285' => array(
'start' => '57912333',
'end' => '57922581',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-343K8.3-001'
),
'ENST00000580184' => array(
'start' => '57912364',
'end' => '57915139',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-343K8.3-002'
),
'ENST00000580960' => array(
'start' => '57771946',
'end' => '57834749',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'RP11-60A24.3-002'
),
'ENST00000581805' => array(
'start' => '57771946',
'end' => '57834609',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'RP11-60A24.3-001'
),
'ENST00000578794' => array(
'start' => '57989038',
'end' => '58005253',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RP11-159D12.5-001'
),
'ENST00000577189' => array(
'start' => '57522248',
'end' => '57523597',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-118E18.2-001'
),
'ENST00000616595' => array(
'start' => '57488508',
'end' => '57488598',
'transcript_biotype' => 'miRNA',
'transcript_name' => 'AC015883.1-201'
),
'ENST00000610469' => array(
'start' => '57955965',
'end' => '57956143',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'RP11-159D12.11-001'
),
'ENST00000623054' => array(
'start' => '57448218',
'end' => '57450291',
'transcript_biotype' => 'TEC',
'transcript_name' => 'RP11-226M10.3-001'
),
'ENST00000623221' => array(
'start' => '57531769',
'end' => '57532355',
'transcript_biotype' => 'TEC',
'transcript_name' => 'RP11-118E18.1-001'
),
'ENST00000623294' => array(
'start' => '57988180',
'end' => '57988760',
'transcript_biotype' => 'TEC',
'transcript_name' => 'RP11-159D12.3-001'
),
'ENSMUST00000018521' => array(
'start' => '88068279',
'end' => '88084729',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Vezf1-001'
),
'ENSMUST00000143052' => array(
'start' => '88073588',
'end' => '88084729',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Vezf1-002'
),
'ENSMUST00000018522' => array(
'start' => '88099146',
'end' => '88194140',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Cuedc1-001'
),
'ENSMUST00000125297' => array(
'start' => '88187821',
'end' => '88193004',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Cuedc1-006'
),
'ENSMUST00000131964' => array(
'start' => '88098058',
'end' => '88100108',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Cuedc1-007'
),
'ENSMUST00000132377' => array(
'start' => '88182303',
'end' => '88183280',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Cuedc1-005'
),
'ENSMUST00000133149' => array(
'start' => '88099290',
'end' => '88185365',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Cuedc1-003'
),
'ENSMUST00000142564' => array(
'start' => '88186009',
'end' => '88188829',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Cuedc1-004'
),
'ENSMUST00000154812' => array(
'start' => '88162261',
'end' => '88194140',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'Cuedc1-002'
),
'ENSMUST00000079866' => array(
'start' => '88047718',
'end' => '88051490',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Srsf1-003'
),
'ENSMUST00000107920' => array(
'start' => '88047803',
'end' => '88050410',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Srsf1-006'
),
'ENSMUST00000132983' => array(
'start' => '88049412',
'end' => '88051051',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Srsf1-004'
),
'ENSMUST00000134824' => array(
'start' => '88048567',
'end' => '88051472',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'Srsf1-002'
),
'ENSMUST00000139129' => array(
'start' => '88047373',
'end' => '88053755',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Srsf1-001'
),
'ENSMUST00000171976' => array(
'start' => '88047725',
'end' => '88048826',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Srsf1-007'
),
'ENSMUST00000172186' => array(
'start' => '88048589',
'end' => '88051122',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'Srsf1-005'
),
'ENSMUST00000024486' => array(
'start' => '88204388',
'end' => '88211507',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Mrps23-001'
),
'ENSMUST00000107915' => array(
'start' => '88204424',
'end' => '88210670',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Mrps23-005'
),
'ENSMUST00000118784' => array(
'start' => '88204411',
'end' => '88211507',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Mrps23-002'
),
'ENSMUST00000139170' => array(
'start' => '88204424',
'end' => '88210230',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Mrps23-003'
),
'ENSMUST00000144070' => array(
'start' => '88204444',
'end' => '88210971',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Mrps23-004'
),
'ENSMUST00000037268' => array(
'start' => '88294058',
'end' => '88295261',
'transcript_biotype' => 'protein_coding',
'transcript_name' => '1700106J16Rik-001'
),
'ENSMUST00000092794' => array(
'start' => '88343889',
'end' => '88718101',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Msi2-006'
),
'ENSMUST00000107908' => array(
'start' => '88685954',
'end' => '88718182',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Msi2-005'
),
'ENSMUST00000107909' => array(
'start' => '88339382',
'end' => '88718229',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Msi2-001'
),
'ENSMUST00000126293' => array(
'start' => '88712188',
'end' => '88718212',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Msi2-004'
),
'ENSMUST00000138790' => array(
'start' => '88477964',
'end' => '88718110',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Msi2-002'
),
'ENSMUST00000144699' => array(
'start' => '88590055',
'end' => '88718513',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Msi2-003'
),
'ENSMUST00000148013' => array(
'start' => '88365515',
'end' => '88590147',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Msi2-007'
),
'ENSMUST00000117358' => array(
'start' => '88335660',
'end' => '88335984',
'transcript_biotype' => 'processed_pseudogene',
'transcript_name' => 'Gm11509-001'
),
'ENSMUST00000120278' => array(
'start' => '88432986',
'end' => '88433514',
'transcript_biotype' => 'processed_pseudogene',
'transcript_name' => 'Gm11510-001'
),
'ENSMUST00000143208' => array(
'start' => '88356291',
'end' => '88363947',
'transcript_biotype' => 'antisense',
'transcript_name' => 'Gm15893-001'
),
'ENSMUST00000152627' => array(
'start' => '88066418',
'end' => '88067452',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'Gm15892-002'
),
'ENSMUST00000153213' => array(
'start' => '88066358',
'end' => '88067026',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'Gm15892-003'
),
'ENSMUST00000156149' => array(
'start' => '88059066',
'end' => '88067476',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'Gm15892-001'
),
'ENSMUST00000175244' => array(
'start' => '88352773',
'end' => '88352864',
'transcript_biotype' => 'miRNA',
'transcript_name' => 'Mir378b-201'
),
'ENSDART00000029843' => array(
'start' => '38416889',
'end' => '38465277',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'vezf1a-201'
),
'ENSDART00000132162' => array(
'start' => '38416881',
'end' => '38459788',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'vezf1a-001'
),
'ENSDART00000025713' => array(
'start' => '30135828',
'end' => '30150773',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'akap1b-201'
),
'ENSDART00000112511' => array(
'start' => '30137947',
'end' => '30154790',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'akap1b-202'
),
'ENSDART00000134878' => array(
'start' => '30141941',
'end' => '30146715',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'akap1b-003'
),
'ENSDART00000136673' => array(
'start' => '30141660',
'end' => '30146134',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'akap1b-004'
),
'ENSDART00000138988' => array(
'start' => '30137945',
'end' => '30154902',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'akap1b-001'
),
'ENSDART00000080328' => array(
'start' => '30162058',
'end' => '30282109',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'nf1a-201'
),
'ENSDART00000154448' => array(
'start' => '30161547',
'end' => '30165146',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'nf1a-002'
),
'ENSDART00000157005' => array(
'start' => '30159199',
'end' => '30282356',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'nf1a-001'
),
'ENSDART00000008854' => array(
'start' => '30459335',
'end' => '30474876',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'wsb1-001'
),
'ENSDART00000147496' => array(
'start' => '30464247',
'end' => '30465063',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'wsb1-002'
),
'ENSDART00000048729' => array(
'start' => '30329810',
'end' => '30340735',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'lgals9l1-201'
),
'ENSDART00000100145' => array(
'start' => '30329807',
'end' => '30340735',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'lgals9l1-001'
),
'ENSDART00000060186' => array(
'start' => '30311255',
'end' => '30315246',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'si:ch211-237d5.4-201'
),
'ENSDART00000153779' => array(
'start' => '30311130',
'end' => '30315965',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'si:ch211-237d5.4-001'
),
'ENSDART00000048103' => array(
'start' => '30368968',
'end' => '30444600',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'KSR1 (1 of 2)-201'
),
'ENSDART00000154254' => array(
'start' => '30368155',
'end' => '30407312',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'KSR1 (1 of 2)-001'
),
'ENSDART00000155473' => array(
'start' => '30369960',
'end' => '30444853',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'KSR1 (1 of 2)-003'
),
'ENSDART00000157145' => array(
'start' => '30368155',
'end' => '30444853',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'KSR1 (1 of 2)-002'
),
'ENSDART00000050649' => array(
'start' => '29816615',
'end' => '30114000',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-005'
),
'ENSDART00000100194' => array(
'start' => '29805601',
'end' => '30114108',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-001'
),
'ENSDART00000136901' => array(
'start' => '30111191',
'end' => '30114066',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-012'
),
'ENSDART00000142827' => array(
'start' => '30111618',
'end' => '30114059',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'msi2b-013'
),
'ENSDART00000142982' => array(
'start' => '30112076',
'end' => '30113922',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-014'
),
'ENSDART00000145918' => array(
'start' => '29876177',
'end' => '30113499',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-015'
),
'ENSDART00000152330' => array(
'start' => '29991267',
'end' => '30130449',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-009'
),
'ENSDART00000152414' => array(
'start' => '29886444',
'end' => '30129723',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-011'
),
'ENSDART00000152790' => array(
'start' => '29991289',
'end' => '30129758',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-010'
),
'ENSDART00000154311' => array(
'start' => '29990944',
'end' => '30114026',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'msi2b-002'
),
'ENSDART00000154714' => array(
'start' => '29816580',
'end' => '30095098',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-004'
),
'ENSDART00000155212' => array(
'start' => '29806642',
'end' => '29886563',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-007'
),
'ENSDART00000156160' => array(
'start' => '29807108',
'end' => '30113378',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-008'
),
'ENSDART00000156584' => array(
'start' => '29806831',
'end' => '29831854',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-006'
),
'ENSDART00000156914' => array(
'start' => '29816613',
'end' => '30095086',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-003'
),
'ENSDART00000033380' => array(
'start' => '30351754',
'end' => '30364922',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'zgc:92326-201'
),
'ENSDART00000060157' => array(
'start' => '30351752',
'end' => '30365141',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'zgc:92326-001'
),
'ENSDART00000143372' => array(
'start' => '30360109',
'end' => '30364958',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'zgc:92326-002'
),
'ENSDART00000100108' => array(
'start' => '30480302',
'end' => '30510486',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'cuedc1b-201'
),
'ENSDART00000141788' => array(
'start' => '30503990',
'end' => '30534947',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'cuedc1b-002'
),
'ENSDART00000145255' => array(
'start' => '30485568',
'end' => '30534914',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'cuedc1b-001'
),
'ENSDART00000100185' => array(
'start' => '30319566',
'end' => '30324664',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'zgc:136924-001'
),
'ENSDART00000100183' => array(
'start' => '30292090',
'end' => '30297858',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'zgc:171951-001'
),
'ENSDART00000129474' => array(
'start' => '30214834',
'end' => '30219111',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'ogmb-001'
),
'ENSDART00000132493' => array(
'start' => '30285525',
'end' => '30287731',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'si:ch211-209m20.9-201'
),
'ENSDART00000155265' => array(
'start' => '30284966',
'end' => '30286912',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'si:ch211-209m20.9-001'
),
'ENSDART00000153607' => array(
'start' => '30303533',
'end' => '30310264',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'si:ch211-237d5.5-001'
),
'ENSDART00000154887' => array(
'start' => '30194274',
'end' => '30207730',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-209m20.6-001'
),
'ENSDART00000153754' => array(
'start' => '30220478',
'end' => '30221584',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-209m20.7-001'
)
),
'accession_map' => array(
'ENST000' => '9606',
'ENSMUST' => '10090',
'ENSDART' => '7955',
'ENSG000' => '9606',
'ENSMUSG' => '10090',
'ENSDARG' => '7955'
),
'sci_name_map' => array(
(int) 9606 => 'Homo_sapiens',
(int) 10090 => 'Mus_musculus',
(int) 7955 => 'Danio_rerio'
),
'UCSC_links' => array(
(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
),
'expressed_region_arr' => array(
'CIL_0007PL_0001' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007PL_0002' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007PL_0003' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007PL_0005' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
)
)
)
$region_arr = array(
'CIL_0007PL_0001' => array(
'genes_in_region' => array(
'ENSG00000136450' => array(
[maximum depth reached]
),
'ENSG00000136451' => array(
[maximum depth reached]
),
'ENSG00000153944' => array(
[maximum depth reached]
),
'ENSG00000166329' => array(
[maximum depth reached]
),
'ENSG00000181610' => array(
[maximum depth reached]
),
'ENSG00000222976' => array(
[maximum depth reached]
),
'ENSG00000242889' => array(
[maximum depth reached]
),
'ENSG00000263499' => array(
[maximum depth reached]
),
'ENSG00000264914' => array(
[maximum depth reached]
),
'ENSG00000265542' => array(
[maximum depth reached]
),
'ENSG00000266086' => array(
[maximum depth reached]
),
'ENSG00000266100' => array(
[maximum depth reached]
),
'ENSG00000278642' => array(
[maximum depth reached]
),
'ENSG00000279281' => array(
[maximum depth reached]
),
'ENSG00000280028' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Colon',
(int) 1 => 'Kidney',
(int) 2 => 'Lung',
(int) 3 => 'Muscle',
(int) 4 => 'Ovary',
(int) 5 => 'Placenta',
(int) 6 => 'Testis',
(int) 7 => 'Muscle',
(int) 8 => 'Heart',
(int) 9 => 'Liver',
(int) 10 => 'Adipose',
(int) 11 => 'Adrenal',
(int) 12 => 'Bladder',
(int) 13 => 'Brain',
(int) 14 => 'Breast',
(int) 15 => 'Colon',
(int) 16 => 'Heart',
(int) 17 => 'Kidney',
(int) 18 => 'Liver',
(int) 19 => 'Lung',
(int) 20 => 'Muscle',
(int) 21 => 'Ovary',
(int) 22 => 'Placenta',
(int) 23 => 'Testis',
(int) 24 => 'Adrenal',
(int) 25 => 'Breast',
(int) 26 => 'Colon',
(int) 27 => 'Kidney',
(int) 28 => 'Lung',
(int) 29 => 'Ovary',
(int) 30 => 'Placenta',
(int) 31 => 'Testis',
(int) 32 => 'Muscle',
(int) 33 => 'Adipose',
(int) 34 => 'Adrenal',
(int) 35 => 'Bladder',
(int) 36 => 'Breast',
(int) 37 => 'Colon',
(int) 38 => 'Heart',
(int) 39 => 'Kidney',
(int) 40 => 'Liver',
(int) 41 => 'Lung',
(int) 42 => 'Muscle',
(int) 43 => 'Ovary',
(int) 44 => 'Placenta',
(int) 45 => 'Testis',
(int) 46 => 'Breast',
(int) 47 => 'Colon',
(int) 48 => 'Heart',
(int) 49 => 'Liver',
(int) 50 => 'Adipose',
(int) 51 => 'Adrenal',
(int) 52 => 'Bladder',
(int) 53 => 'Brain',
(int) 54 => 'Breast',
(int) 55 => 'Colon',
(int) 56 => 'Heart',
(int) 57 => 'Kidney',
(int) 58 => 'Liver',
(int) 59 => 'Lung',
(int) 60 => 'Muscle',
(int) 61 => 'Ovary',
(int) 62 => 'Placenta',
(int) 63 => 'Testis',
(int) 64 => 'Bladder',
(int) 65 => 'Kidney',
(int) 66 => 'Bladder',
(int) 67 => 'Colon',
(int) 68 => 'Lung',
(int) 69 => 'Muscle',
(int) 70 => 'Ovary',
(int) 71 => 'Lung',
(int) 72 => 'Muscle',
(int) 73 => 'Adrenal',
(int) 74 => 'Lung',
(int) 75 => 'Ovary',
(int) 76 => 'Testis',
(int) 77 => 'Adipose',
(int) 78 => 'Breast',
(int) 79 => 'Heart',
(int) 80 => 'Kidney',
(int) 81 => 'Liver',
(int) 82 => 'Lung',
(int) 83 => 'Muscle',
(int) 84 => 'Muscle',
(int) 85 => 'Ovary',
(int) 86 => 'Bladder',
(int) 87 => 'Colon',
(int) 88 => 'Heart',
(int) 89 => 'Adipose',
(int) 90 => 'Bladder',
(int) 91 => 'Brain',
(int) 92 => 'Breast',
(int) 93 => 'Colon',
(int) 94 => 'Heart',
(int) 95 => 'Liver',
(int) 96 => 'Lung',
(int) 97 => 'Ovary',
(int) 98 => 'Placenta',
(int) 99 => 'Testis',
(int) 100 => 'Adrenal',
(int) 101 => 'Bladder',
(int) 102 => 'Brain',
(int) 103 => 'Breast',
(int) 104 => 'Colon',
(int) 105 => 'Kidney',
(int) 106 => 'Liver',
(int) 107 => 'Lung',
(int) 108 => 'Muscle',
(int) 109 => 'Placenta',
(int) 110 => 'Ovary',
(int) 111 => 'Placenta',
(int) 112 => 'Liver',
(int) 113 => 'Kidney',
(int) 114 => 'Adrenal',
(int) 115 => 'Kidney',
(int) 116 => 'Lung',
(int) 117 => 'Ovary',
(int) 118 => 'Testis',
(int) 119 => 'Adipose',
(int) 120 => 'Adrenal',
(int) 121 => 'Bladder',
(int) 122 => 'Brain',
(int) 123 => 'Breast',
(int) 124 => 'Colon',
(int) 125 => 'Heart',
(int) 126 => 'Kidney',
(int) 127 => 'Liver',
(int) 128 => 'Lung',
(int) 129 => 'Muscle',
(int) 130 => 'Ovary',
(int) 131 => 'Placenta',
(int) 132 => 'Testis',
(int) 133 => 'Adipose',
(int) 134 => 'Adrenal',
(int) 135 => 'Bladder',
(int) 136 => 'Brain',
(int) 137 => 'Breast',
(int) 138 => 'Colon',
(int) 139 => 'Heart',
(int) 140 => 'Kidney',
(int) 141 => 'Liver',
(int) 142 => 'Lung',
(int) 143 => 'Muscle',
(int) 144 => 'Ovary',
(int) 145 => 'Placenta',
(int) 146 => 'Testis',
(int) 147 => 'Colon',
(int) 148 => 'Muscle',
(int) 149 => 'Adipose',
(int) 150 => 'Adrenal',
(int) 151 => 'Breast',
(int) 152 => 'Heart',
(int) 153 => 'Kidney',
(int) 154 => 'Bladder',
(int) 155 => 'Brain',
(int) 156 => 'Colon',
(int) 157 => 'Heart',
(int) 158 => 'Liver',
(int) 159 => 'Lung',
(int) 160 => 'Muscle',
(int) 161 => 'Ovary',
(int) 162 => 'Placenta',
(int) 163 => 'Adrenal',
(int) 164 => 'Bladder',
(int) 165 => 'Brain',
(int) 166 => 'Breast',
(int) 167 => 'Colon',
(int) 168 => 'Heart',
(int) 169 => 'Kidney',
(int) 170 => 'Liver',
(int) 171 => 'Lung',
(int) 172 => 'Ovary',
(int) 173 => 'Testis',
(int) 174 => 'Brain',
(int) 175 => 'Adrenal',
(int) 176 => 'Breast',
(int) 177 => 'Brain',
(int) 178 => 'Colon',
(int) 179 => 'Heart',
(int) 180 => 'Ovary',
(int) 181 => 'Testis',
(int) 182 => 'Adipose',
(int) 183 => 'Adrenal',
(int) 184 => 'Bladder',
(int) 185 => 'Brain',
(int) 186 => 'Breast',
(int) 187 => 'Colon',
(int) 188 => 'Heart',
(int) 189 => 'Kidney',
(int) 190 => 'Ovary',
(int) 191 => 'Placenta',
(int) 192 => 'Testis',
(int) 193 => 'Brain',
(int) 194 => 'Heart',
(int) 195 => 'Kidney',
(int) 196 => 'Liver',
(int) 197 => 'Testis',
(int) 198 => 'Bladder',
(int) 199 => 'Brain',
(int) 200 => 'Breast',
(int) 201 => 'Colon',
(int) 202 => 'Heart',
(int) 203 => 'Kidney',
(int) 204 => 'Liver',
(int) 205 => 'Lung',
(int) 206 => 'Muscle',
(int) 207 => 'Ovary',
(int) 208 => 'Breast',
(int) 209 => 'Colon',
(int) 210 => 'Heart',
(int) 211 => 'Lung',
(int) 212 => 'Adrenal',
(int) 213 => 'Kidney',
(int) 214 => 'Adipose',
(int) 215 => 'Adrenal',
(int) 216 => 'Bladder',
(int) 217 => 'Brain',
(int) 218 => 'Breast',
(int) 219 => 'Colon',
(int) 220 => 'Heart',
(int) 221 => 'Kidney',
(int) 222 => 'Liver',
(int) 223 => 'Lung',
(int) 224 => 'Muscle',
(int) 225 => 'Ovary',
(int) 226 => 'Placenta',
(int) 227 => 'Testis',
(int) 228 => 'Adrenal',
(int) 229 => 'Bladder',
(int) 230 => 'Brain',
(int) 231 => 'Breast',
(int) 232 => 'Colon',
(int) 233 => 'Heart',
(int) 234 => 'Liver',
(int) 235 => 'Lung',
(int) 236 => 'Ovary',
(int) 237 => 'Placenta'
)
),
'CIL_0007PL_0002' => array(
'genes_in_region' => array(
'ENSMUSG00000018377' => array(
[maximum depth reached]
),
'ENSMUSG00000018378' => array(
[maximum depth reached]
),
'ENSMUSG00000018379' => array(
[maximum depth reached]
),
'ENSMUSG00000023723' => array(
[maximum depth reached]
),
'ENSMUSG00000034031' => array(
[maximum depth reached]
),
'ENSMUSG00000069769' => array(
[maximum depth reached]
),
'ENSMUSG00000081304' => array(
[maximum depth reached]
),
'ENSMUSG00000084411' => array(
[maximum depth reached]
),
'ENSMUSG00000085246' => array(
[maximum depth reached]
),
'ENSMUSG00000087373' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Adipose',
(int) 1 => 'Adrenal',
(int) 2 => 'Bladder',
(int) 3 => 'Brain',
(int) 4 => 'Breast',
(int) 5 => 'Colon',
(int) 6 => 'Heart',
(int) 7 => 'Kidney',
(int) 8 => 'Liver',
(int) 9 => 'Lung',
(int) 10 => 'Muscle',
(int) 11 => 'Ovary',
(int) 12 => 'Placenta',
(int) 13 => 'Testis',
(int) 14 => 'Brain',
(int) 15 => 'Breast',
(int) 16 => 'Heart',
(int) 17 => 'Liver',
(int) 18 => 'Ovary',
(int) 19 => 'Placenta',
(int) 20 => 'Testis',
(int) 21 => 'Adipose',
(int) 22 => 'Adrenal',
(int) 23 => 'Bladder',
(int) 24 => 'Brain',
(int) 25 => 'Breast',
(int) 26 => 'Colon',
(int) 27 => 'Heart',
(int) 28 => 'Kidney',
(int) 29 => 'Liver',
(int) 30 => 'Lung',
(int) 31 => 'Muscle',
(int) 32 => 'Ovary',
(int) 33 => 'Placenta',
(int) 34 => 'Testis',
(int) 35 => 'Placenta',
(int) 36 => 'Testis',
(int) 37 => 'Liver',
(int) 38 => 'Testis',
(int) 39 => 'Adipose',
(int) 40 => 'Bladder',
(int) 41 => 'Brain',
(int) 42 => 'Breast',
(int) 43 => 'Heart',
(int) 44 => 'Kidney',
(int) 45 => 'Liver',
(int) 46 => 'Lung',
(int) 47 => 'Muscle',
(int) 48 => 'Ovary',
(int) 49 => 'Placenta',
(int) 50 => 'Testis',
(int) 51 => 'Breast',
(int) 52 => 'Liver',
(int) 53 => 'Muscle',
(int) 54 => 'Adipose',
(int) 55 => 'Adrenal',
(int) 56 => 'Bladder',
(int) 57 => 'Brain',
(int) 58 => 'Breast',
(int) 59 => 'Colon',
(int) 60 => 'Heart',
(int) 61 => 'Kidney',
(int) 62 => 'Liver',
(int) 63 => 'Lung',
(int) 64 => 'Muscle',
(int) 65 => 'Ovary',
(int) 66 => 'Placenta',
(int) 67 => 'Testis',
(int) 68 => 'Adipose',
(int) 69 => 'Breast',
(int) 70 => 'Colon',
(int) 71 => 'Heart',
(int) 72 => 'Kidney',
(int) 73 => 'Liver',
(int) 74 => 'Lung',
(int) 75 => 'Ovary',
(int) 76 => 'Placenta',
(int) 77 => 'Testis',
(int) 78 => 'Bladder',
(int) 79 => 'Brain',
(int) 80 => 'Breast',
(int) 81 => 'Heart',
(int) 82 => 'Ovary',
(int) 83 => 'Placenta',
(int) 84 => 'Testis',
(int) 85 => 'Brain',
(int) 86 => 'Ovary',
(int) 87 => 'Placenta',
(int) 88 => 'Testis',
(int) 89 => 'Adipose',
(int) 90 => 'Adrenal',
(int) 91 => 'Bladder',
(int) 92 => 'Brain',
(int) 93 => 'Breast',
(int) 94 => 'Colon',
(int) 95 => 'Heart',
(int) 96 => 'Kidney',
(int) 97 => 'Liver',
(int) 98 => 'Lung',
(int) 99 => 'Muscle',
(int) 100 => 'Ovary',
(int) 101 => 'Placenta',
(int) 102 => 'Testis',
(int) 103 => 'Adipose',
(int) 104 => 'Adrenal',
(int) 105 => 'Breast',
(int) 106 => 'Colon',
(int) 107 => 'Kidney',
(int) 108 => 'Liver',
(int) 109 => 'Lung',
(int) 110 => 'Ovary',
(int) 111 => 'Brain',
(int) 112 => 'Ovary',
(int) 113 => 'Placenta',
(int) 114 => 'Testis',
(int) 115 => 'Adipose',
(int) 116 => 'Adrenal',
(int) 117 => 'Bladder',
(int) 118 => 'Brain',
(int) 119 => 'Breast',
(int) 120 => 'Colon',
(int) 121 => 'Heart',
(int) 122 => 'Kidney',
(int) 123 => 'Liver',
(int) 124 => 'Lung',
(int) 125 => 'Muscle',
(int) 126 => 'Ovary',
(int) 127 => 'Placenta',
(int) 128 => 'Testis',
(int) 129 => 'Adrenal',
(int) 130 => 'Liver',
(int) 131 => 'Ovary',
(int) 132 => 'Placenta',
(int) 133 => 'Testis',
(int) 134 => 'Adipose',
(int) 135 => 'Adrenal',
(int) 136 => 'Brain',
(int) 137 => 'Liver',
(int) 138 => 'Lung',
(int) 139 => 'Ovary',
(int) 140 => 'Testis',
(int) 141 => 'Placenta',
(int) 142 => 'Testis',
(int) 143 => 'Adipose',
(int) 144 => 'Adrenal',
(int) 145 => 'Brain',
(int) 146 => 'Breast',
(int) 147 => 'Colon',
(int) 148 => 'Kidney',
(int) 149 => 'Liver',
(int) 150 => 'Ovary',
(int) 151 => 'Placenta',
(int) 152 => 'Testis',
(int) 153 => 'Adipose',
(int) 154 => 'Adrenal',
(int) 155 => 'Brain',
(int) 156 => 'Kidney',
(int) 157 => 'Liver',
(int) 158 => 'Muscle',
(int) 159 => 'Ovary',
(int) 160 => 'Placenta',
(int) 161 => 'Testis',
(int) 162 => 'Adipose',
(int) 163 => 'Adrenal',
(int) 164 => 'Bladder',
(int) 165 => 'Brain',
(int) 166 => 'Breast',
(int) 167 => 'Colon',
(int) 168 => 'Heart',
(int) 169 => 'Kidney',
(int) 170 => 'Liver',
(int) 171 => 'Lung',
(int) 172 => 'Muscle',
(int) 173 => 'Ovary',
(int) 174 => 'Placenta',
(int) 175 => 'Testis',
(int) 176 => 'Adipose',
(int) 177 => 'Adrenal',
(int) 178 => 'Bladder',
(int) 179 => 'Brain',
(int) 180 => 'Breast',
(int) 181 => 'Colon',
(int) 182 => 'Heart',
(int) 183 => 'Kidney',
(int) 184 => 'Liver',
(int) 185 => 'Lung',
(int) 186 => 'Muscle',
(int) 187 => 'Ovary',
(int) 188 => 'Placenta',
(int) 189 => 'Testis',
(int) 190 => 'Testis',
(int) 191 => 'Bladder',
(int) 192 => 'Brain',
(int) 193 => 'Breast',
(int) 194 => 'Kidney',
(int) 195 => 'Liver',
(int) 196 => 'Ovary',
(int) 197 => 'Placenta',
(int) 198 => 'Testis',
(int) 199 => 'Bladder',
(int) 200 => 'Brain',
(int) 201 => 'Kidney',
(int) 202 => 'Muscle',
(int) 203 => 'Ovary',
(int) 204 => 'Placenta',
(int) 205 => 'Adipose',
(int) 206 => 'Adrenal',
(int) 207 => 'Bladder',
(int) 208 => 'Brain',
(int) 209 => 'Breast',
(int) 210 => 'Colon',
(int) 211 => 'Heart',
(int) 212 => 'Kidney',
(int) 213 => 'Liver',
(int) 214 => 'Lung',
(int) 215 => 'Muscle',
(int) 216 => 'Ovary',
(int) 217 => 'Placenta',
(int) 218 => 'Testis',
(int) 219 => 'Adipose',
(int) 220 => 'Brain',
(int) 221 => 'Breast',
(int) 222 => 'Colon',
(int) 223 => 'Kidney',
(int) 224 => 'Liver',
(int) 225 => 'Lung',
(int) 226 => 'Muscle',
(int) 227 => 'Ovary',
(int) 228 => 'Placenta',
(int) 229 => 'Testis',
(int) 230 => 'Adipose',
(int) 231 => 'Brain',
(int) 232 => 'Liver',
(int) 233 => 'Muscle',
(int) 234 => 'Ovary',
(int) 235 => 'Placenta',
(int) 236 => 'Testis',
(int) 237 => 'Adipose',
(int) 238 => 'Adrenal',
(int) 239 => 'Brain',
(int) 240 => 'Breast',
(int) 241 => 'Colon',
(int) 242 => 'Heart',
(int) 243 => 'Kidney',
(int) 244 => 'Liver',
(int) 245 => 'Lung',
(int) 246 => 'Muscle',
(int) 247 => 'Ovary',
(int) 248 => 'Placenta',
(int) 249 => 'Testis'
)
),
'CIL_0007PL_0003' => array(
'genes_in_region' => array(
'ENSDARG00000008247' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Brain',
(int) 1 => 'Heart',
(int) 2 => 'Kidney',
(int) 3 => 'Liver'
)
),
'CIL_0007PL_0005' => array(
'genes_in_region' => array(
'ENSDARG00000006062' => array(
[maximum depth reached]
),
'ENSDARG00000012982' => array(
[maximum depth reached]
),
'ENSDARG00000021343' => array(
[maximum depth reached]
),
'ENSDARG00000025903' => array(
[maximum depth reached]
),
'ENSDARG00000030025' => array(
[maximum depth reached]
),
'ENSDARG00000030933' => array(
[maximum depth reached]
),
'ENSDARG00000041060' => array(
[maximum depth reached]
),
'ENSDARG00000054748' => array(
[maximum depth reached]
),
'ENSDARG00000069058' => array(
[maximum depth reached]
),
'ENSDARG00000087311' => array(
[maximum depth reached]
),
'ENSDARG00000089444' => array(
[maximum depth reached]
),
'ENSDARG00000093059' => array(
[maximum depth reached]
),
'ENSDARG00000097767' => array(
[maximum depth reached]
),
'ENSDARG00000098011' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Brain',
(int) 1 => 'Heart',
(int) 2 => 'Kidney',
(int) 3 => 'Kidney',
(int) 4 => 'Kidney',
(int) 5 => 'Heart',
(int) 6 => 'Brain',
(int) 7 => 'Heart',
(int) 8 => 'Kidney',
(int) 9 => 'Liver',
(int) 10 => 'Muscle',
(int) 11 => 'Brain',
(int) 12 => 'Heart',
(int) 13 => 'Kidney',
(int) 14 => 'Liver',
(int) 15 => 'Muscle',
(int) 16 => 'Heart',
(int) 17 => 'Brain',
(int) 18 => 'Heart',
(int) 19 => 'Liver',
(int) 20 => 'Brain',
(int) 21 => 'Heart',
(int) 22 => 'Kidney',
(int) 23 => 'Liver',
(int) 24 => 'Muscle',
(int) 25 => 'Heart',
(int) 26 => 'Kidney',
(int) 27 => 'Kidney',
(int) 28 => 'Liver',
(int) 29 => 'Muscle',
(int) 30 => 'Brain',
(int) 31 => 'Heart',
(int) 32 => 'Brain',
(int) 33 => 'Heart',
(int) 34 => 'Kidney',
(int) 35 => 'Liver',
(int) 36 => 'Heart',
(int) 37 => 'Liver',
(int) 38 => 'Muscle',
(int) 39 => 'Kidney',
(int) 40 => 'Liver',
(int) 41 => 'Muscle',
(int) 42 => 'Kidney',
(int) 43 => 'Liver',
(int) 44 => 'Heart',
(int) 45 => 'Brain',
(int) 46 => 'Heart',
(int) 47 => 'Kidney',
(int) 48 => 'Brain',
(int) 49 => 'Heart',
(int) 50 => 'Kidney',
(int) 51 => 'Liver',
(int) 52 => 'Muscle',
(int) 53 => 'Brain',
(int) 54 => 'Heart',
(int) 55 => 'Kidney',
(int) 56 => 'Liver',
(int) 57 => 'Muscle',
(int) 58 => 'Heart',
(int) 59 => 'Liver',
(int) 60 => 'Brain',
(int) 61 => 'Heart',
(int) 62 => 'Kidney',
(int) 63 => 'Brain',
(int) 64 => 'Heart',
(int) 65 => 'Kidney',
(int) 66 => 'Muscle',
(int) 67 => 'Brain',
(int) 68 => 'Heart',
(int) 69 => 'Kidney',
(int) 70 => 'Muscle',
(int) 71 => 'Brain',
(int) 72 => 'Brain',
(int) 73 => 'Heart',
(int) 74 => 'Kidney',
(int) 75 => 'Muscle',
(int) 76 => 'Brain',
(int) 77 => 'Heart',
(int) 78 => 'Kidney',
(int) 79 => 'Muscle'
)
)
)
$gene_desc_arr = array(
'ENSG00000136450' => 'serine/arginine-rich splicing factor 1',
'ENSG00000136451' => 'vascular endothelial zinc finger 1',
'ENSG00000153944' => 'musashi RNA-binding protein 2',
'ENSG00000166329' => 'coiled-coil domain containing 182',
'ENSG00000180891' => 'CUE domain containing 1',
'ENSG00000181610' => 'mitochondrial ribosomal protein S23',
'ENSG00000222976' => 'RNA, 7SK small nuclear pseudogene 94',
'ENSG00000238447' => 'RNA, U7 small nuclear 134 pseudogene',
'ENSG00000242889' => 'RNA, 7SL, cytoplasmic 449, pseudogene',
'ENSG00000263499' => null,
'ENSG00000264112' => null,
'ENSG00000264914' => null,
'ENSG00000265542' => null,
'ENSG00000266086' => 'Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000463235}',
'ENSG00000266100' => null,
'ENSG00000278285' => null,
'ENSG00000278642' => null,
'ENSG00000279281' => null,
'ENSG00000280028' => null,
'ENSG00000280233' => null,
'ENSMUSG00000018377' => 'vascular endothelial zinc finger 1',
'ENSMUSG00000018378' => 'CUE domain containing 1',
'ENSMUSG00000018379' => 'serine/arginine-rich splicing factor 1',
'ENSMUSG00000023723' => 'mitochondrial ribosomal protein S23',
'ENSMUSG00000034031' => 'RIKEN cDNA 1700106J16 gene',
'ENSMUSG00000069769' => 'musashi RNA-binding protein 2',
'ENSMUSG00000081304' => 'predicted gene 11509',
'ENSMUSG00000084411' => 'predicted gene 11510',
'ENSMUSG00000085246' => 'predicted gene 15893',
'ENSMUSG00000087373' => 'predicted gene 15892',
'ENSMUSG00000092985' => 'microRNA 378b',
'ENSDARG00000008247' => 'vascular endothelial zinc finger 1a',
'ENSDARG00000006062' => 'A kinase (PRKA) anchor protein 1b',
'ENSDARG00000012982' => 'neurofibromin 1a',
'ENSDARG00000021343' => 'WD repeat and SOCS box-containing 1',
'ENSDARG00000025903' => 'lectin, galactoside-binding, soluble, 9 (galectin 9)-like 1',
'ENSDARG00000030025' => 'si:ch211-237d5.4',
'ENSDARG00000030933' => 'kinase suppressor of ras 1',
'ENSDARG00000032614' => 'musashi homolog 2b (Drosophila)',
'ENSDARG00000041060' => 'zgc:92326',
'ENSDARG00000054748' => 'CUE domain containing 1b',
'ENSDARG00000069058' => 'zgc:136924',
'ENSDARG00000087311' => 'zgc:171951',
'ENSDARG00000089444' => 'oligodendrocyte myelin glycoprotein b',
'ENSDARG00000093059' => 'si:ch211-209m20.9',
'ENSDARG00000097413' => 'si:ch211-237d5.5',
'ENSDARG00000097767' => 'si:ch211-209m20.6',
'ENSDARG00000098011' => 'si:ch211-209m20.7'
)
$gene_name_arr = array(
'ENSG00000136450' => 'SRSF1',
'ENSG00000136451' => 'VEZF1',
'ENSG00000153944' => 'MSI2',
'ENSG00000166329' => 'CCDC182',
'ENSG00000180891' => 'CUEDC1',
'ENSG00000181610' => 'MRPS23',
'ENSG00000222976' => 'RN7SKP94',
'ENSG00000238447' => 'RNU7-134P',
'ENSG00000242889' => 'RN7SL449P',
'ENSG00000263499' => 'RP11-118E18.4',
'ENSG00000264112' => 'RP11-159D12.2',
'ENSG00000264914' => 'RP11-343K8.3',
'ENSG00000265542' => 'RP11-60A24.3',
'ENSG00000266086' => 'RP11-159D12.5',
'ENSG00000266100' => 'RP11-118E18.2',
'ENSG00000278285' => 'AC015883.1',
'ENSG00000278642' => 'RP11-159D12.11',
'ENSG00000279281' => 'RP11-226M10.3',
'ENSG00000280028' => 'RP11-118E18.1',
'ENSG00000280233' => 'RP11-159D12.3',
'ENSMUSG00000018377' => 'Vezf1',
'ENSMUSG00000018378' => 'Cuedc1',
'ENSMUSG00000018379' => 'Srsf1',
'ENSMUSG00000023723' => 'Mrps23',
'ENSMUSG00000034031' => '1700106J16Rik',
'ENSMUSG00000069769' => 'Msi2',
'ENSMUSG00000081304' => 'Gm11509',
'ENSMUSG00000084411' => 'Gm11510',
'ENSMUSG00000085246' => 'Gm15893',
'ENSMUSG00000087373' => 'Gm15892',
'ENSMUSG00000092985' => 'Mir378b',
'ENSDARG00000008247' => 'vezf1a',
'ENSDARG00000006062' => 'akap1b',
'ENSDARG00000012982' => 'nf1a',
'ENSDARG00000021343' => 'wsb1',
'ENSDARG00000025903' => 'lgals9l1',
'ENSDARG00000030025' => 'si:ch211-237d5.4',
'ENSDARG00000030933' => 'KSR1 (1 of 2)',
'ENSDARG00000032614' => 'msi2b',
'ENSDARG00000041060' => 'zgc:92326',
'ENSDARG00000054748' => 'cuedc1b',
'ENSDARG00000069058' => 'zgc:136924',
'ENSDARG00000087311' => 'zgc:171951',
'ENSDARG00000089444' => 'ogmb',
'ENSDARG00000093059' => 'si:ch211-209m20.9',
'ENSDARG00000097413' => 'si:ch211-237d5.5',
'ENSDARG00000097767' => 'si:ch211-209m20.6',
'ENSDARG00000098011' => 'si:ch211-209m20.7'
)
$accession_table = array(
(int) 0 => array(
'region_elements' => array(
'region_element_id' => 'CIL_0007PL_0001',
'tax_id' => '9606',
'chromosome' => '17',
'seq_start' => '57406597',
'seq_end' => '58005077',
'region_length' => '598480',
'region_type' => 'UCNEbase',
'el_id' => 'MSI2'
)
),
(int) 1 => array(
'region_elements' => array(
'region_element_id' => 'CIL_0007PL_0002',
'tax_id' => '10090',
'chromosome' => '11',
'seq_start' => '88049942',
'seq_end' => '88585488',
'region_length' => '535546',
'region_type' => 'UCNEbase',
'el_id' => 'MSI2'
)
),
(int) 2 => array(
'region_elements' => array(
'region_element_id' => 'CIL_0007PL_0003',
'tax_id' => '7955',
'chromosome' => '10',
'seq_start' => '38465073',
'seq_end' => '38465300',
'region_length' => '227',
'region_type' => 'UCNEbase',
'el_id' => 'MSI2'
)
),
(int) 3 => array(
'region_elements' => array(
'region_element_id' => 'CIL_0007PL_0004',
'tax_id' => '7955',
'chromosome' => '15',
'seq_start' => '15091427',
'seq_end' => '15091590',
'region_length' => '163',
'region_type' => 'UCNEbase',
'el_id' => 'MSI2'
)
),
(int) 4 => array(
'region_elements' => array(
'region_element_id' => 'CIL_0007PL_0005',
'tax_id' => '7955',
'chromosome' => '15',
'seq_start' => '30091498',
'seq_end' => '30537230',
'region_length' => '445732',
'region_type' => 'UCNEbase',
'el_id' => 'MSI2'
)
),
(int) 5 => array(
'region_elements' => array(
'region_element_id' => 'CIL_0007PL_0006',
'tax_id' => '7955',
'chromosome' => '21',
'seq_start' => '38404226',
'seq_end' => '38405181',
'region_length' => '955',
'region_type' => 'UCNEbase',
'el_id' => 'MSI2'
)
)
)
$all_tissues = array(
(int) 0 => 'Adipose',
(int) 27 => 'Adrenal',
(int) 57 => 'Bladder',
(int) 85 => 'Brain',
(int) 138 => 'Breast',
(int) 174 => 'Colon',
(int) 208 => 'Heart',
(int) 263 => 'Kidney',
(int) 319 => 'Liver',
(int) 371 => 'Lung',
(int) 405 => 'Muscle',
(int) 449 => 'Ovary',
(int) 493 => 'Placenta',
(int) 531 => 'Testis'
)
$column_titles = array(
(int) 0 => 'Region Sub-Accession',
(int) 1 => 'Tax ID',
(int) 2 => 'Position',
(int) 3 => 'Region Length'
)
$geneviewer = array(
(int) 9606 => array(
'version' => 'GRCh38',
'coord_key' => 'Homo sapiens',
'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
'desc' => 'Gene structures from GENCODE 19',
'twoBitURI' => '/static/files/GRCh38.2bit',
'bwgURI' => '/static/files/GRCh38.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
),
(int) 10090 => array(
'version' => 'GRCm38',
'coord_key' => 'Mus musculus',
'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
'desc' => 'Gene structures from GENCODE 19',
'twoBitURI' => '/static/files/GRCm38.2bit',
'bwgURI' => '/static/files/GRCm38.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
),
(int) 7955 => array(
'version' => 'Zv9',
'coord_key' => 'Danio rerio',
'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
'twoBitURI' => '/static/files/Zv9.2bit',
'bwgURI' => '/static/files/Zv9.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
)
)
$transcript_count = (int) 153
$longest_tissue_len = (int) 8
$transcript_data = array(
'ENST00000258962' => array(
'start' => '58004849',
'end' => '58007346',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'SRSF1-001'
),
'ENST00000578430' => array(
'start' => '58006242',
'end' => '58007346',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'SRSF1-007'
),
'ENST00000581497' => array(
'start' => '58003493',
'end' => '58005134',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'SRSF1-009'
),
'ENST00000581979' => array(
'start' => '58003807',
'end' => '58007232',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'SRSF1-004'
),
'ENST00000582730' => array(
'start' => '58003360',
'end' => '58007261',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'SRSF1-003'
),
'ENST00000583741' => array(
'start' => '58004849',
'end' => '58007261',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'SRSF1-005'
),
'ENST00000584668' => array(
'start' => '58003802',
'end' => '58006405',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'SRSF1-008'
),
'ENST00000584773' => array(
'start' => '58004588',
'end' => '58007261',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'SRSF1-002'
),
'ENST00000585096' => array(
'start' => '58004822',
'end' => '58007273',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'SRSF1-006'
),
'ENST00000258963' => array(
'start' => '57971547',
'end' => '57982864',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'VEZF1-005'
),
'ENST00000581208' => array(
'start' => '57973759',
'end' => '57988152',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'VEZF1-001'
),
'ENST00000583932' => array(
'start' => '57982910',
'end' => '57988259',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'VEZF1-004'
),
'ENST00000584396' => array(
'start' => '57973759',
'end' => '57985348',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'VEZF1-002'
),
'ENST00000284073' => array(
'start' => '57256534',
'end' => '57684685',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MSI2-001'
),
'ENST00000322684' => array(
'start' => '57257013',
'end' => '57632900',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MSI2-003'
),
'ENST00000416426' => array(
'start' => '57255851',
'end' => '57680121',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MSI2-002'
),
'ENST00000442934' => array(
'start' => '57285844',
'end' => '57680297',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MSI2-005'
),
'ENST00000577241' => array(
'start' => '57596903',
'end' => '57616631',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'MSI2-015'
),
'ENST00000579180' => array(
'start' => '57294685',
'end' => '57632905',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MSI2-006'
),
'ENST00000579205' => array(
'start' => '57406812',
'end' => '57627302',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'MSI2-011'
),
'ENST00000579466' => array(
'start' => '57671474',
'end' => '57675056',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'MSI2-017'
),
'ENST00000579483' => array(
'start' => '57262115',
'end' => '57268550',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'MSI2-004'
),
'ENST00000579505' => array(
'start' => '57440690',
'end' => '57675059',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'MSI2-013'
),
'ENST00000579531' => array(
'start' => '57257042',
'end' => '57274433',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'MSI2-019'
),
'ENST00000579590' => array(
'start' => '57257018',
'end' => '57432614',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MSI2-009'
),
'ENST00000581523' => array(
'start' => '57256743',
'end' => '57274489',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'MSI2-018'
),
'ENST00000581776' => array(
'start' => '57256740',
'end' => '57365021',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'MSI2-008'
),
'ENST00000582453' => array(
'start' => '57256774',
'end' => '57565995',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'MSI2-014'
),
'ENST00000582772' => array(
'start' => '57444487',
'end' => '57596950',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'MSI2-012'
),
'ENST00000583705' => array(
'start' => '57625572',
'end' => '57633183',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'MSI2-007'
),
'ENST00000583821' => array(
'start' => '57626915',
'end' => '57631949',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'MSI2-016'
),
'ENST00000584476' => array(
'start' => '57257124',
'end' => '57262433',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'MSI2-010'
),
'ENST00000299415' => array(
'start' => '57744481',
'end' => '57745312',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CCDC182-001'
),
'ENST00000360238' => array(
'start' => '57862976',
'end' => '57903389',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CUEDC1-002'
),
'ENST00000407144' => array(
'start' => '57862696',
'end' => '57892688',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CUEDC1-013'
),
'ENST00000577422' => array(
'start' => '57862875',
'end' => '57867305',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'CUEDC1-010'
),
'ENST00000577497' => array(
'start' => '57862963',
'end' => '57866857',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'CUEDC1-008'
),
'ENST00000577589' => array(
'start' => '57872811',
'end' => '57885837',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CUEDC1-003'
),
'ENST00000577830' => array(
'start' => '57861243',
'end' => '57955323',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CUEDC1-001'
),
'ENST00000577840' => array(
'start' => '57863272',
'end' => '57955257',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CUEDC1-004'
),
'ENST00000578357' => array(
'start' => '57862963',
'end' => '57869938',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'CUEDC1-011'
),
'ENST00000581391' => array(
'start' => '57862875',
'end' => '57868465',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'CUEDC1-006'
),
'ENST00000581898' => array(
'start' => '57862963',
'end' => '57872670',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CUEDC1-005'
),
'ENST00000582951' => array(
'start' => '57862875',
'end' => '57867630',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'CUEDC1-007'
),
'ENST00000584746' => array(
'start' => '57861604',
'end' => '57871365',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'CUEDC1-012'
),
'ENST00000585294' => array(
'start' => '57862976',
'end' => '57867415',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'CUEDC1-009'
),
'ENST00000313608' => array(
'start' => '57834781',
'end' => '57850056',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MRPS23-001'
),
'ENST00000578444' => array(
'start' => '57840800',
'end' => '57850044',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MRPS23-004'
),
'ENST00000579380' => array(
'start' => '57841004',
'end' => '57850056',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MRPS23-003'
),
'ENST00000579768' => array(
'start' => '57848736',
'end' => '57849997',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'MRPS23-002'
),
'ENST00000411044' => array(
'start' => '57789449',
'end' => '57789732',
'transcript_biotype' => 'misc_RNA',
'transcript_name' => 'RN7SKP94-201'
),
'ENST00000458997' => array(
'start' => '57685529',
'end' => '57685592',
'transcript_biotype' => 'snRNA',
'transcript_name' => 'RNU7-134P-201'
),
'ENST00000464937' => array(
'start' => '57618108',
'end' => '57618393',
'transcript_biotype' => 'misc_RNA',
'transcript_name' => 'RN7SL449P-201'
),
'ENST00000578662' => array(
'start' => '57600856',
'end' => '57608412',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-118E18.4-001'
),
'ENST00000577267' => array(
'start' => '57989042',
'end' => '57993479',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'RP11-159D12.2-002'
),
'ENST00000582096' => array(
'start' => '57989039',
'end' => '57991521',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'RP11-159D12.2-003'
),
'ENST00000585065' => array(
'start' => '57989044',
'end' => '57994850',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'RP11-159D12.2-001'
),
'ENST00000579285' => array(
'start' => '57912333',
'end' => '57922581',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-343K8.3-001'
),
'ENST00000580184' => array(
'start' => '57912364',
'end' => '57915139',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-343K8.3-002'
),
'ENST00000580960' => array(
'start' => '57771946',
'end' => '57834749',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'RP11-60A24.3-002'
),
'ENST00000581805' => array(
'start' => '57771946',
'end' => '57834609',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'RP11-60A24.3-001'
),
'ENST00000578794' => array(
'start' => '57989038',
'end' => '58005253',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'RP11-159D12.5-001'
),
'ENST00000577189' => array(
'start' => '57522248',
'end' => '57523597',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-118E18.2-001'
),
'ENST00000616595' => array(
'start' => '57488508',
'end' => '57488598',
'transcript_biotype' => 'miRNA',
'transcript_name' => 'AC015883.1-201'
),
'ENST00000610469' => array(
'start' => '57955965',
'end' => '57956143',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'RP11-159D12.11-001'
),
'ENST00000623054' => array(
'start' => '57448218',
'end' => '57450291',
'transcript_biotype' => 'TEC',
'transcript_name' => 'RP11-226M10.3-001'
),
'ENST00000623221' => array(
'start' => '57531769',
'end' => '57532355',
'transcript_biotype' => 'TEC',
'transcript_name' => 'RP11-118E18.1-001'
),
'ENST00000623294' => array(
'start' => '57988180',
'end' => '57988760',
'transcript_biotype' => 'TEC',
'transcript_name' => 'RP11-159D12.3-001'
),
'ENSMUST00000018521' => array(
'start' => '88068279',
'end' => '88084729',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Vezf1-001'
),
'ENSMUST00000143052' => array(
'start' => '88073588',
'end' => '88084729',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Vezf1-002'
),
'ENSMUST00000018522' => array(
'start' => '88099146',
'end' => '88194140',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Cuedc1-001'
),
'ENSMUST00000125297' => array(
'start' => '88187821',
'end' => '88193004',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Cuedc1-006'
),
'ENSMUST00000131964' => array(
'start' => '88098058',
'end' => '88100108',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Cuedc1-007'
),
'ENSMUST00000132377' => array(
'start' => '88182303',
'end' => '88183280',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Cuedc1-005'
),
'ENSMUST00000133149' => array(
'start' => '88099290',
'end' => '88185365',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Cuedc1-003'
),
'ENSMUST00000142564' => array(
'start' => '88186009',
'end' => '88188829',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Cuedc1-004'
),
'ENSMUST00000154812' => array(
'start' => '88162261',
'end' => '88194140',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'Cuedc1-002'
),
'ENSMUST00000079866' => array(
'start' => '88047718',
'end' => '88051490',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Srsf1-003'
),
'ENSMUST00000107920' => array(
'start' => '88047803',
'end' => '88050410',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Srsf1-006'
),
'ENSMUST00000132983' => array(
'start' => '88049412',
'end' => '88051051',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Srsf1-004'
),
'ENSMUST00000134824' => array(
'start' => '88048567',
'end' => '88051472',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'Srsf1-002'
),
'ENSMUST00000139129' => array(
'start' => '88047373',
'end' => '88053755',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Srsf1-001'
),
'ENSMUST00000171976' => array(
'start' => '88047725',
'end' => '88048826',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Srsf1-007'
),
'ENSMUST00000172186' => array(
'start' => '88048589',
'end' => '88051122',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'Srsf1-005'
),
'ENSMUST00000024486' => array(
'start' => '88204388',
'end' => '88211507',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Mrps23-001'
),
'ENSMUST00000107915' => array(
'start' => '88204424',
'end' => '88210670',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Mrps23-005'
),
'ENSMUST00000118784' => array(
'start' => '88204411',
'end' => '88211507',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Mrps23-002'
),
'ENSMUST00000139170' => array(
'start' => '88204424',
'end' => '88210230',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Mrps23-003'
),
'ENSMUST00000144070' => array(
'start' => '88204444',
'end' => '88210971',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Mrps23-004'
),
'ENSMUST00000037268' => array(
'start' => '88294058',
'end' => '88295261',
'transcript_biotype' => 'protein_coding',
'transcript_name' => '1700106J16Rik-001'
),
'ENSMUST00000092794' => array(
'start' => '88343889',
'end' => '88718101',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Msi2-006'
),
'ENSMUST00000107908' => array(
'start' => '88685954',
'end' => '88718182',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Msi2-005'
),
'ENSMUST00000107909' => array(
'start' => '88339382',
'end' => '88718229',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Msi2-001'
),
'ENSMUST00000126293' => array(
'start' => '88712188',
'end' => '88718212',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Msi2-004'
),
'ENSMUST00000138790' => array(
'start' => '88477964',
'end' => '88718110',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Msi2-002'
),
'ENSMUST00000144699' => array(
'start' => '88590055',
'end' => '88718513',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Msi2-003'
),
'ENSMUST00000148013' => array(
'start' => '88365515',
'end' => '88590147',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Msi2-007'
),
'ENSMUST00000117358' => array(
'start' => '88335660',
'end' => '88335984',
'transcript_biotype' => 'processed_pseudogene',
'transcript_name' => 'Gm11509-001'
),
'ENSMUST00000120278' => array(
'start' => '88432986',
'end' => '88433514',
'transcript_biotype' => 'processed_pseudogene',
'transcript_name' => 'Gm11510-001'
),
'ENSMUST00000143208' => array(
'start' => '88356291',
'end' => '88363947',
'transcript_biotype' => 'antisense',
'transcript_name' => 'Gm15893-001'
),
'ENSMUST00000152627' => array(
'start' => '88066418',
'end' => '88067452',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'Gm15892-002'
),
'ENSMUST00000153213' => array(
'start' => '88066358',
'end' => '88067026',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'Gm15892-003'
),
'ENSMUST00000156149' => array(
'start' => '88059066',
'end' => '88067476',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'Gm15892-001'
),
'ENSMUST00000175244' => array(
'start' => '88352773',
'end' => '88352864',
'transcript_biotype' => 'miRNA',
'transcript_name' => 'Mir378b-201'
),
'ENSDART00000029843' => array(
'start' => '38416889',
'end' => '38465277',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'vezf1a-201'
),
'ENSDART00000132162' => array(
'start' => '38416881',
'end' => '38459788',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'vezf1a-001'
),
'ENSDART00000025713' => array(
'start' => '30135828',
'end' => '30150773',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'akap1b-201'
),
'ENSDART00000112511' => array(
'start' => '30137947',
'end' => '30154790',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'akap1b-202'
),
'ENSDART00000134878' => array(
'start' => '30141941',
'end' => '30146715',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'akap1b-003'
),
'ENSDART00000136673' => array(
'start' => '30141660',
'end' => '30146134',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'akap1b-004'
),
'ENSDART00000138988' => array(
'start' => '30137945',
'end' => '30154902',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'akap1b-001'
),
'ENSDART00000080328' => array(
'start' => '30162058',
'end' => '30282109',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'nf1a-201'
),
'ENSDART00000154448' => array(
'start' => '30161547',
'end' => '30165146',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'nf1a-002'
),
'ENSDART00000157005' => array(
'start' => '30159199',
'end' => '30282356',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'nf1a-001'
),
'ENSDART00000008854' => array(
'start' => '30459335',
'end' => '30474876',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'wsb1-001'
),
'ENSDART00000147496' => array(
'start' => '30464247',
'end' => '30465063',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'wsb1-002'
),
'ENSDART00000048729' => array(
'start' => '30329810',
'end' => '30340735',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'lgals9l1-201'
),
'ENSDART00000100145' => array(
'start' => '30329807',
'end' => '30340735',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'lgals9l1-001'
),
'ENSDART00000060186' => array(
'start' => '30311255',
'end' => '30315246',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'si:ch211-237d5.4-201'
),
'ENSDART00000153779' => array(
'start' => '30311130',
'end' => '30315965',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'si:ch211-237d5.4-001'
),
'ENSDART00000048103' => array(
'start' => '30368968',
'end' => '30444600',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'KSR1 (1 of 2)-201'
),
'ENSDART00000154254' => array(
'start' => '30368155',
'end' => '30407312',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'KSR1 (1 of 2)-001'
),
'ENSDART00000155473' => array(
'start' => '30369960',
'end' => '30444853',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'KSR1 (1 of 2)-003'
),
'ENSDART00000157145' => array(
'start' => '30368155',
'end' => '30444853',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'KSR1 (1 of 2)-002'
),
'ENSDART00000050649' => array(
'start' => '29816615',
'end' => '30114000',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-005'
),
'ENSDART00000100194' => array(
'start' => '29805601',
'end' => '30114108',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-001'
),
'ENSDART00000136901' => array(
'start' => '30111191',
'end' => '30114066',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-012'
),
'ENSDART00000142827' => array(
'start' => '30111618',
'end' => '30114059',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'msi2b-013'
),
'ENSDART00000142982' => array(
'start' => '30112076',
'end' => '30113922',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-014'
),
'ENSDART00000145918' => array(
'start' => '29876177',
'end' => '30113499',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-015'
),
'ENSDART00000152330' => array(
'start' => '29991267',
'end' => '30130449',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-009'
),
'ENSDART00000152414' => array(
'start' => '29886444',
'end' => '30129723',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-011'
),
'ENSDART00000152790' => array(
'start' => '29991289',
'end' => '30129758',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-010'
),
'ENSDART00000154311' => array(
'start' => '29990944',
'end' => '30114026',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'msi2b-002'
),
'ENSDART00000154714' => array(
'start' => '29816580',
'end' => '30095098',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-004'
),
'ENSDART00000155212' => array(
'start' => '29806642',
'end' => '29886563',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-007'
),
'ENSDART00000156160' => array(
'start' => '29807108',
'end' => '30113378',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-008'
),
'ENSDART00000156584' => array(
'start' => '29806831',
'end' => '29831854',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-006'
),
'ENSDART00000156914' => array(
'start' => '29816613',
'end' => '30095086',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-003'
),
'ENSDART00000033380' => array(
'start' => '30351754',
'end' => '30364922',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'zgc:92326-201'
),
'ENSDART00000060157' => array(
'start' => '30351752',
'end' => '30365141',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'zgc:92326-001'
),
'ENSDART00000143372' => array(
'start' => '30360109',
'end' => '30364958',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'zgc:92326-002'
),
'ENSDART00000100108' => array(
'start' => '30480302',
'end' => '30510486',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'cuedc1b-201'
),
'ENSDART00000141788' => array(
'start' => '30503990',
'end' => '30534947',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'cuedc1b-002'
),
'ENSDART00000145255' => array(
'start' => '30485568',
'end' => '30534914',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'cuedc1b-001'
),
'ENSDART00000100185' => array(
'start' => '30319566',
'end' => '30324664',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'zgc:136924-001'
),
'ENSDART00000100183' => array(
'start' => '30292090',
'end' => '30297858',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'zgc:171951-001'
),
'ENSDART00000129474' => array(
'start' => '30214834',
'end' => '30219111',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'ogmb-001'
),
'ENSDART00000132493' => array(
'start' => '30285525',
'end' => '30287731',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'si:ch211-209m20.9-201'
),
'ENSDART00000155265' => array(
'start' => '30284966',
'end' => '30286912',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'si:ch211-209m20.9-001'
),
'ENSDART00000153607' => array(
'start' => '30303533',
'end' => '30310264',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'si:ch211-237d5.5-001'
),
'ENSDART00000154887' => array(
'start' => '30194274',
'end' => '30207730',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-209m20.6-001'
),
'ENSDART00000153754' => array(
'start' => '30220478',
'end' => '30221584',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-209m20.7-001'
)
)
$accession_map = array(
'ENST000' => '9606',
'ENSMUST' => '10090',
'ENSDART' => '7955',
'ENSG000' => '9606',
'ENSMUSG' => '10090',
'ENSDARG' => '7955'
)
$sci_name_map = array(
(int) 9606 => 'Homo_sapiens',
(int) 10090 => 'Mus_musculus',
(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
'CIL_0007PL_0001' => array(
'genes_in_region' => array(
'ENSG00000136450' => array(
[maximum depth reached]
),
'ENSG00000136451' => array(
[maximum depth reached]
),
'ENSG00000153944' => array(
[maximum depth reached]
),
'ENSG00000166329' => array(
[maximum depth reached]
),
'ENSG00000181610' => array(
[maximum depth reached]
),
'ENSG00000222976' => array(
[maximum depth reached]
),
'ENSG00000242889' => array(
[maximum depth reached]
),
'ENSG00000263499' => array(
[maximum depth reached]
),
'ENSG00000264914' => array(
[maximum depth reached]
),
'ENSG00000265542' => array(
[maximum depth reached]
),
'ENSG00000266086' => array(
[maximum depth reached]
),
'ENSG00000266100' => array(
[maximum depth reached]
),
'ENSG00000278642' => array(
[maximum depth reached]
),
'ENSG00000279281' => array(
[maximum depth reached]
),
'ENSG00000280028' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Colon',
(int) 1 => 'Kidney',
(int) 2 => 'Lung',
(int) 3 => 'Muscle',
(int) 4 => 'Ovary',
(int) 5 => 'Placenta',
(int) 6 => 'Testis',
(int) 7 => 'Muscle',
(int) 8 => 'Heart',
(int) 9 => 'Liver',
(int) 10 => 'Adipose',
(int) 11 => 'Adrenal',
(int) 12 => 'Bladder',
(int) 13 => 'Brain',
(int) 14 => 'Breast',
(int) 15 => 'Colon',
(int) 16 => 'Heart',
(int) 17 => 'Kidney',
(int) 18 => 'Liver',
(int) 19 => 'Lung',
(int) 20 => 'Muscle',
(int) 21 => 'Ovary',
(int) 22 => 'Placenta',
(int) 23 => 'Testis',
(int) 24 => 'Adrenal',
(int) 25 => 'Breast',
(int) 26 => 'Colon',
(int) 27 => 'Kidney',
(int) 28 => 'Lung',
(int) 29 => 'Ovary',
(int) 30 => 'Placenta',
(int) 31 => 'Testis',
(int) 32 => 'Muscle',
(int) 33 => 'Adipose',
(int) 34 => 'Adrenal',
(int) 35 => 'Bladder',
(int) 36 => 'Breast',
(int) 37 => 'Colon',
(int) 38 => 'Heart',
(int) 39 => 'Kidney',
(int) 40 => 'Liver',
(int) 41 => 'Lung',
(int) 42 => 'Muscle',
(int) 43 => 'Ovary',
(int) 44 => 'Placenta',
(int) 45 => 'Testis',
(int) 46 => 'Breast',
(int) 47 => 'Colon',
(int) 48 => 'Heart',
(int) 49 => 'Liver',
(int) 50 => 'Adipose',
(int) 51 => 'Adrenal',
(int) 52 => 'Bladder',
(int) 53 => 'Brain',
(int) 54 => 'Breast',
(int) 55 => 'Colon',
(int) 56 => 'Heart',
(int) 57 => 'Kidney',
(int) 58 => 'Liver',
(int) 59 => 'Lung',
(int) 60 => 'Muscle',
(int) 61 => 'Ovary',
(int) 62 => 'Placenta',
(int) 63 => 'Testis',
(int) 64 => 'Bladder',
(int) 65 => 'Kidney',
(int) 66 => 'Bladder',
(int) 67 => 'Colon',
(int) 68 => 'Lung',
(int) 69 => 'Muscle',
(int) 70 => 'Ovary',
(int) 71 => 'Lung',
(int) 72 => 'Muscle',
(int) 73 => 'Adrenal',
(int) 74 => 'Lung',
(int) 75 => 'Ovary',
(int) 76 => 'Testis',
(int) 77 => 'Adipose',
(int) 78 => 'Breast',
(int) 79 => 'Heart',
(int) 80 => 'Kidney',
(int) 81 => 'Liver',
(int) 82 => 'Lung',
(int) 83 => 'Muscle',
(int) 84 => 'Muscle',
(int) 85 => 'Ovary',
(int) 86 => 'Bladder',
(int) 87 => 'Colon',
(int) 88 => 'Heart',
(int) 89 => 'Adipose',
(int) 90 => 'Bladder',
(int) 91 => 'Brain',
(int) 92 => 'Breast',
(int) 93 => 'Colon',
(int) 94 => 'Heart',
(int) 95 => 'Liver',
(int) 96 => 'Lung',
(int) 97 => 'Ovary',
(int) 98 => 'Placenta',
(int) 99 => 'Testis',
(int) 100 => 'Adrenal',
(int) 101 => 'Bladder',
(int) 102 => 'Brain',
(int) 103 => 'Breast',
(int) 104 => 'Colon',
(int) 105 => 'Kidney',
(int) 106 => 'Liver',
(int) 107 => 'Lung',
(int) 108 => 'Muscle',
(int) 109 => 'Placenta',
(int) 110 => 'Ovary',
(int) 111 => 'Placenta',
(int) 112 => 'Liver',
(int) 113 => 'Kidney',
(int) 114 => 'Adrenal',
(int) 115 => 'Kidney',
(int) 116 => 'Lung',
(int) 117 => 'Ovary',
(int) 118 => 'Testis',
(int) 119 => 'Adipose',
(int) 120 => 'Adrenal',
(int) 121 => 'Bladder',
(int) 122 => 'Brain',
(int) 123 => 'Breast',
(int) 124 => 'Colon',
(int) 125 => 'Heart',
(int) 126 => 'Kidney',
(int) 127 => 'Liver',
(int) 128 => 'Lung',
(int) 129 => 'Muscle',
(int) 130 => 'Ovary',
(int) 131 => 'Placenta',
(int) 132 => 'Testis',
(int) 133 => 'Adipose',
(int) 134 => 'Adrenal',
(int) 135 => 'Bladder',
(int) 136 => 'Brain',
(int) 137 => 'Breast',
(int) 138 => 'Colon',
(int) 139 => 'Heart',
(int) 140 => 'Kidney',
(int) 141 => 'Liver',
(int) 142 => 'Lung',
(int) 143 => 'Muscle',
(int) 144 => 'Ovary',
(int) 145 => 'Placenta',
(int) 146 => 'Testis',
(int) 147 => 'Colon',
(int) 148 => 'Muscle',
(int) 149 => 'Adipose',
(int) 150 => 'Adrenal',
(int) 151 => 'Breast',
(int) 152 => 'Heart',
(int) 153 => 'Kidney',
(int) 154 => 'Bladder',
(int) 155 => 'Brain',
(int) 156 => 'Colon',
(int) 157 => 'Heart',
(int) 158 => 'Liver',
(int) 159 => 'Lung',
(int) 160 => 'Muscle',
(int) 161 => 'Ovary',
(int) 162 => 'Placenta',
(int) 163 => 'Adrenal',
(int) 164 => 'Bladder',
(int) 165 => 'Brain',
(int) 166 => 'Breast',
(int) 167 => 'Colon',
(int) 168 => 'Heart',
(int) 169 => 'Kidney',
(int) 170 => 'Liver',
(int) 171 => 'Lung',
(int) 172 => 'Ovary',
(int) 173 => 'Testis',
(int) 174 => 'Brain',
(int) 175 => 'Adrenal',
(int) 176 => 'Breast',
(int) 177 => 'Brain',
(int) 178 => 'Colon',
(int) 179 => 'Heart',
(int) 180 => 'Ovary',
(int) 181 => 'Testis',
(int) 182 => 'Adipose',
(int) 183 => 'Adrenal',
(int) 184 => 'Bladder',
(int) 185 => 'Brain',
(int) 186 => 'Breast',
(int) 187 => 'Colon',
(int) 188 => 'Heart',
(int) 189 => 'Kidney',
(int) 190 => 'Ovary',
(int) 191 => 'Placenta',
(int) 192 => 'Testis',
(int) 193 => 'Brain',
(int) 194 => 'Heart',
(int) 195 => 'Kidney',
(int) 196 => 'Liver',
(int) 197 => 'Testis',
(int) 198 => 'Bladder',
(int) 199 => 'Brain',
(int) 200 => 'Breast',
(int) 201 => 'Colon',
(int) 202 => 'Heart',
(int) 203 => 'Kidney',
(int) 204 => 'Liver',
(int) 205 => 'Lung',
(int) 206 => 'Muscle',
(int) 207 => 'Ovary',
(int) 208 => 'Breast',
(int) 209 => 'Colon',
(int) 210 => 'Heart',
(int) 211 => 'Lung',
(int) 212 => 'Adrenal',
(int) 213 => 'Kidney',
(int) 214 => 'Adipose',
(int) 215 => 'Adrenal',
(int) 216 => 'Bladder',
(int) 217 => 'Brain',
(int) 218 => 'Breast',
(int) 219 => 'Colon',
(int) 220 => 'Heart',
(int) 221 => 'Kidney',
(int) 222 => 'Liver',
(int) 223 => 'Lung',
(int) 224 => 'Muscle',
(int) 225 => 'Ovary',
(int) 226 => 'Placenta',
(int) 227 => 'Testis',
(int) 228 => 'Adrenal',
(int) 229 => 'Bladder',
(int) 230 => 'Brain',
(int) 231 => 'Breast',
(int) 232 => 'Colon',
(int) 233 => 'Heart',
(int) 234 => 'Liver',
(int) 235 => 'Lung',
(int) 236 => 'Ovary',
(int) 237 => 'Placenta'
)
),
'CIL_0007PL_0002' => array(
'genes_in_region' => array(
'ENSMUSG00000018377' => array(
[maximum depth reached]
),
'ENSMUSG00000018378' => array(
[maximum depth reached]
),
'ENSMUSG00000018379' => array(
[maximum depth reached]
),
'ENSMUSG00000023723' => array(
[maximum depth reached]
),
'ENSMUSG00000034031' => array(
[maximum depth reached]
),
'ENSMUSG00000069769' => array(
[maximum depth reached]
),
'ENSMUSG00000081304' => array(
[maximum depth reached]
),
'ENSMUSG00000084411' => array(
[maximum depth reached]
),
'ENSMUSG00000085246' => array(
[maximum depth reached]
),
'ENSMUSG00000087373' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Adipose',
(int) 1 => 'Adrenal',
(int) 2 => 'Bladder',
(int) 3 => 'Brain',
(int) 4 => 'Breast',
(int) 5 => 'Colon',
(int) 6 => 'Heart',
(int) 7 => 'Kidney',
(int) 8 => 'Liver',
(int) 9 => 'Lung',
(int) 10 => 'Muscle',
(int) 11 => 'Ovary',
(int) 12 => 'Placenta',
(int) 13 => 'Testis',
(int) 14 => 'Brain',
(int) 15 => 'Breast',
(int) 16 => 'Heart',
(int) 17 => 'Liver',
(int) 18 => 'Ovary',
(int) 19 => 'Placenta',
(int) 20 => 'Testis',
(int) 21 => 'Adipose',
(int) 22 => 'Adrenal',
(int) 23 => 'Bladder',
(int) 24 => 'Brain',
(int) 25 => 'Breast',
(int) 26 => 'Colon',
(int) 27 => 'Heart',
(int) 28 => 'Kidney',
(int) 29 => 'Liver',
(int) 30 => 'Lung',
(int) 31 => 'Muscle',
(int) 32 => 'Ovary',
(int) 33 => 'Placenta',
(int) 34 => 'Testis',
(int) 35 => 'Placenta',
(int) 36 => 'Testis',
(int) 37 => 'Liver',
(int) 38 => 'Testis',
(int) 39 => 'Adipose',
(int) 40 => 'Bladder',
(int) 41 => 'Brain',
(int) 42 => 'Breast',
(int) 43 => 'Heart',
(int) 44 => 'Kidney',
(int) 45 => 'Liver',
(int) 46 => 'Lung',
(int) 47 => 'Muscle',
(int) 48 => 'Ovary',
(int) 49 => 'Placenta',
(int) 50 => 'Testis',
(int) 51 => 'Breast',
(int) 52 => 'Liver',
(int) 53 => 'Muscle',
(int) 54 => 'Adipose',
(int) 55 => 'Adrenal',
(int) 56 => 'Bladder',
(int) 57 => 'Brain',
(int) 58 => 'Breast',
(int) 59 => 'Colon',
(int) 60 => 'Heart',
(int) 61 => 'Kidney',
(int) 62 => 'Liver',
(int) 63 => 'Lung',
(int) 64 => 'Muscle',
(int) 65 => 'Ovary',
(int) 66 => 'Placenta',
(int) 67 => 'Testis',
(int) 68 => 'Adipose',
(int) 69 => 'Breast',
(int) 70 => 'Colon',
(int) 71 => 'Heart',
(int) 72 => 'Kidney',
(int) 73 => 'Liver',
(int) 74 => 'Lung',
(int) 75 => 'Ovary',
(int) 76 => 'Placenta',
(int) 77 => 'Testis',
(int) 78 => 'Bladder',
(int) 79 => 'Brain',
(int) 80 => 'Breast',
(int) 81 => 'Heart',
(int) 82 => 'Ovary',
(int) 83 => 'Placenta',
(int) 84 => 'Testis',
(int) 85 => 'Brain',
(int) 86 => 'Ovary',
(int) 87 => 'Placenta',
(int) 88 => 'Testis',
(int) 89 => 'Adipose',
(int) 90 => 'Adrenal',
(int) 91 => 'Bladder',
(int) 92 => 'Brain',
(int) 93 => 'Breast',
(int) 94 => 'Colon',
(int) 95 => 'Heart',
(int) 96 => 'Kidney',
(int) 97 => 'Liver',
(int) 98 => 'Lung',
(int) 99 => 'Muscle',
(int) 100 => 'Ovary',
(int) 101 => 'Placenta',
(int) 102 => 'Testis',
(int) 103 => 'Adipose',
(int) 104 => 'Adrenal',
(int) 105 => 'Breast',
(int) 106 => 'Colon',
(int) 107 => 'Kidney',
(int) 108 => 'Liver',
(int) 109 => 'Lung',
(int) 110 => 'Ovary',
(int) 111 => 'Brain',
(int) 112 => 'Ovary',
(int) 113 => 'Placenta',
(int) 114 => 'Testis',
(int) 115 => 'Adipose',
(int) 116 => 'Adrenal',
(int) 117 => 'Bladder',
(int) 118 => 'Brain',
(int) 119 => 'Breast',
(int) 120 => 'Colon',
(int) 121 => 'Heart',
(int) 122 => 'Kidney',
(int) 123 => 'Liver',
(int) 124 => 'Lung',
(int) 125 => 'Muscle',
(int) 126 => 'Ovary',
(int) 127 => 'Placenta',
(int) 128 => 'Testis',
(int) 129 => 'Adrenal',
(int) 130 => 'Liver',
(int) 131 => 'Ovary',
(int) 132 => 'Placenta',
(int) 133 => 'Testis',
(int) 134 => 'Adipose',
(int) 135 => 'Adrenal',
(int) 136 => 'Brain',
(int) 137 => 'Liver',
(int) 138 => 'Lung',
(int) 139 => 'Ovary',
(int) 140 => 'Testis',
(int) 141 => 'Placenta',
(int) 142 => 'Testis',
(int) 143 => 'Adipose',
(int) 144 => 'Adrenal',
(int) 145 => 'Brain',
(int) 146 => 'Breast',
(int) 147 => 'Colon',
(int) 148 => 'Kidney',
(int) 149 => 'Liver',
(int) 150 => 'Ovary',
(int) 151 => 'Placenta',
(int) 152 => 'Testis',
(int) 153 => 'Adipose',
(int) 154 => 'Adrenal',
(int) 155 => 'Brain',
(int) 156 => 'Kidney',
(int) 157 => 'Liver',
(int) 158 => 'Muscle',
(int) 159 => 'Ovary',
(int) 160 => 'Placenta',
(int) 161 => 'Testis',
(int) 162 => 'Adipose',
(int) 163 => 'Adrenal',
(int) 164 => 'Bladder',
(int) 165 => 'Brain',
(int) 166 => 'Breast',
(int) 167 => 'Colon',
(int) 168 => 'Heart',
(int) 169 => 'Kidney',
(int) 170 => 'Liver',
(int) 171 => 'Lung',
(int) 172 => 'Muscle',
(int) 173 => 'Ovary',
(int) 174 => 'Placenta',
(int) 175 => 'Testis',
(int) 176 => 'Adipose',
(int) 177 => 'Adrenal',
(int) 178 => 'Bladder',
(int) 179 => 'Brain',
(int) 180 => 'Breast',
(int) 181 => 'Colon',
(int) 182 => 'Heart',
(int) 183 => 'Kidney',
(int) 184 => 'Liver',
(int) 185 => 'Lung',
(int) 186 => 'Muscle',
(int) 187 => 'Ovary',
(int) 188 => 'Placenta',
(int) 189 => 'Testis',
(int) 190 => 'Testis',
(int) 191 => 'Bladder',
(int) 192 => 'Brain',
(int) 193 => 'Breast',
(int) 194 => 'Kidney',
(int) 195 => 'Liver',
(int) 196 => 'Ovary',
(int) 197 => 'Placenta',
(int) 198 => 'Testis',
(int) 199 => 'Bladder',
(int) 200 => 'Brain',
(int) 201 => 'Kidney',
(int) 202 => 'Muscle',
(int) 203 => 'Ovary',
(int) 204 => 'Placenta',
(int) 205 => 'Adipose',
(int) 206 => 'Adrenal',
(int) 207 => 'Bladder',
(int) 208 => 'Brain',
(int) 209 => 'Breast',
(int) 210 => 'Colon',
(int) 211 => 'Heart',
(int) 212 => 'Kidney',
(int) 213 => 'Liver',
(int) 214 => 'Lung',
(int) 215 => 'Muscle',
(int) 216 => 'Ovary',
(int) 217 => 'Placenta',
(int) 218 => 'Testis',
(int) 219 => 'Adipose',
(int) 220 => 'Brain',
(int) 221 => 'Breast',
(int) 222 => 'Colon',
(int) 223 => 'Kidney',
(int) 224 => 'Liver',
(int) 225 => 'Lung',
(int) 226 => 'Muscle',
(int) 227 => 'Ovary',
(int) 228 => 'Placenta',
(int) 229 => 'Testis',
(int) 230 => 'Adipose',
(int) 231 => 'Brain',
(int) 232 => 'Liver',
(int) 233 => 'Muscle',
(int) 234 => 'Ovary',
(int) 235 => 'Placenta',
(int) 236 => 'Testis',
(int) 237 => 'Adipose',
(int) 238 => 'Adrenal',
(int) 239 => 'Brain',
(int) 240 => 'Breast',
(int) 241 => 'Colon',
(int) 242 => 'Heart',
(int) 243 => 'Kidney',
(int) 244 => 'Liver',
(int) 245 => 'Lung',
(int) 246 => 'Muscle',
(int) 247 => 'Ovary',
(int) 248 => 'Placenta',
(int) 249 => 'Testis'
)
),
'CIL_0007PL_0003' => array(
'genes_in_region' => array(
'ENSDARG00000008247' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Brain',
(int) 1 => 'Heart',
(int) 2 => 'Kidney',
(int) 3 => 'Liver'
)
),
'CIL_0007PL_0005' => array(
'genes_in_region' => array(
'ENSDARG00000006062' => array(
[maximum depth reached]
),
'ENSDARG00000012982' => array(
[maximum depth reached]
),
'ENSDARG00000021343' => array(
[maximum depth reached]
),
'ENSDARG00000025903' => array(
[maximum depth reached]
),
'ENSDARG00000030025' => array(
[maximum depth reached]
),
'ENSDARG00000030933' => array(
[maximum depth reached]
),
'ENSDARG00000041060' => array(
[maximum depth reached]
),
'ENSDARG00000054748' => array(
[maximum depth reached]
),
'ENSDARG00000069058' => array(
[maximum depth reached]
),
'ENSDARG00000087311' => array(
[maximum depth reached]
),
'ENSDARG00000089444' => array(
[maximum depth reached]
),
'ENSDARG00000093059' => array(
[maximum depth reached]
),
'ENSDARG00000097767' => array(
[maximum depth reached]
),
'ENSDARG00000098011' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Brain',
(int) 1 => 'Heart',
(int) 2 => 'Kidney',
(int) 3 => 'Kidney',
(int) 4 => 'Kidney',
(int) 5 => 'Heart',
(int) 6 => 'Brain',
(int) 7 => 'Heart',
(int) 8 => 'Kidney',
(int) 9 => 'Liver',
(int) 10 => 'Muscle',
(int) 11 => 'Brain',
(int) 12 => 'Heart',
(int) 13 => 'Kidney',
(int) 14 => 'Liver',
(int) 15 => 'Muscle',
(int) 16 => 'Heart',
(int) 17 => 'Brain',
(int) 18 => 'Heart',
(int) 19 => 'Liver',
(int) 20 => 'Brain',
(int) 21 => 'Heart',
(int) 22 => 'Kidney',
(int) 23 => 'Liver',
(int) 24 => 'Muscle',
(int) 25 => 'Heart',
(int) 26 => 'Kidney',
(int) 27 => 'Kidney',
(int) 28 => 'Liver',
(int) 29 => 'Muscle',
(int) 30 => 'Brain',
(int) 31 => 'Heart',
(int) 32 => 'Brain',
(int) 33 => 'Heart',
(int) 34 => 'Kidney',
(int) 35 => 'Liver',
(int) 36 => 'Heart',
(int) 37 => 'Liver',
(int) 38 => 'Muscle',
(int) 39 => 'Kidney',
(int) 40 => 'Liver',
(int) 41 => 'Muscle',
(int) 42 => 'Kidney',
(int) 43 => 'Liver',
(int) 44 => 'Heart',
(int) 45 => 'Brain',
(int) 46 => 'Heart',
(int) 47 => 'Kidney',
(int) 48 => 'Brain',
(int) 49 => 'Heart',
(int) 50 => 'Kidney',
(int) 51 => 'Liver',
(int) 52 => 'Muscle',
(int) 53 => 'Brain',
(int) 54 => 'Heart',
(int) 55 => 'Kidney',
(int) 56 => 'Liver',
(int) 57 => 'Muscle',
(int) 58 => 'Heart',
(int) 59 => 'Liver',
(int) 60 => 'Brain',
(int) 61 => 'Heart',
(int) 62 => 'Kidney',
(int) 63 => 'Brain',
(int) 64 => 'Heart',
(int) 65 => 'Kidney',
(int) 66 => 'Muscle',
(int) 67 => 'Brain',
(int) 68 => 'Heart',
(int) 69 => 'Kidney',
(int) 70 => 'Muscle',
(int) 71 => 'Brain',
(int) 72 => 'Brain',
(int) 73 => 'Heart',
(int) 74 => 'Kidney',
(int) 75 => 'Muscle',
(int) 76 => 'Brain',
(int) 77 => 'Heart',
(int) 78 => 'Kidney',
(int) 79 => 'Muscle'
)
)
)
$accession = array(
'region_elements' => array(
'region_element_id' => 'CIL_0007PL_0006',
'tax_id' => '7955',
'chromosome' => '21',
'seq_start' => '38404226',
'seq_end' => '38405181',
'region_length' => '955',
'region_type' => 'UCNEbase',
'el_id' => 'MSI2'
)
)
$gene_el = array(
'ENSDART00000153754' => array(
'Brain' => array(
'average_FPKM' => '0.246',
'stddev_FPKM' => '0.09'
),
'Heart' => array(
'average_FPKM' => '0.730',
'stddev_FPKM' => '0.61'
),
'Kidney' => array(
'average_FPKM' => '2.136',
'stddev_FPKM' => '1.31'
),
'Muscle' => array(
'average_FPKM' => '1.025',
'stddev_FPKM' => '0.00'
)
)
)
$gene_key = 'ENSDARG00000098011'
$is_first = false
$tran_el = array(
'Brain' => array(
'average_FPKM' => '0.246',
'stddev_FPKM' => '0.09'
),
'Heart' => array(
'average_FPKM' => '0.730',
'stddev_FPKM' => '0.61'
),
'Kidney' => array(
'average_FPKM' => '2.136',
'stddev_FPKM' => '1.31'
),
'Muscle' => array(
'average_FPKM' => '1.025',
'stddev_FPKM' => '0.00'
)
)
$tran_key = 'ENSDART00000153754'
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108
Warning (2): Invalid argument supplied for foreach() [APP/View/Region/show.ctp, line 46]Code Context
<tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
<?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
'region_arr' => array(
'CIL_0007PL_0001' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007PL_0002' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007PL_0003' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007PL_0005' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
)
),
'gene_desc_arr' => array(
'ENSG00000136450' => 'serine/arginine-rich splicing factor 1',
'ENSG00000136451' => 'vascular endothelial zinc finger 1',
'ENSG00000153944' => 'musashi RNA-binding protein 2',
'ENSG00000166329' => 'coiled-coil domain containing 182',
'ENSG00000180891' => 'CUE domain containing 1',
'ENSG00000181610' => 'mitochondrial ribosomal protein S23',
'ENSG00000222976' => 'RNA, 7SK small nuclear pseudogene 94',
'ENSG00000238447' => 'RNA, U7 small nuclear 134 pseudogene',
'ENSG00000242889' => 'RNA, 7SL, cytoplasmic 449, pseudogene',
'ENSG00000263499' => null,
'ENSG00000264112' => null,
'ENSG00000264914' => null,
'ENSG00000265542' => null,
'ENSG00000266086' => 'Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000463235}',
'ENSG00000266100' => null,
'ENSG00000278285' => null,
'ENSG00000278642' => null,
'ENSG00000279281' => null,
'ENSG00000280028' => null,
'ENSG00000280233' => null,
'ENSMUSG00000018377' => 'vascular endothelial zinc finger 1',
'ENSMUSG00000018378' => 'CUE domain containing 1',
'ENSMUSG00000018379' => 'serine/arginine-rich splicing factor 1',
'ENSMUSG00000023723' => 'mitochondrial ribosomal protein S23',
'ENSMUSG00000034031' => 'RIKEN cDNA 1700106J16 gene',
'ENSMUSG00000069769' => 'musashi RNA-binding protein 2',
'ENSMUSG00000081304' => 'predicted gene 11509',
'ENSMUSG00000084411' => 'predicted gene 11510',
'ENSMUSG00000085246' => 'predicted gene 15893',
'ENSMUSG00000087373' => 'predicted gene 15892',
'ENSMUSG00000092985' => 'microRNA 378b',
'ENSDARG00000008247' => 'vascular endothelial zinc finger 1a',
'ENSDARG00000006062' => 'A kinase (PRKA) anchor protein 1b',
'ENSDARG00000012982' => 'neurofibromin 1a',
'ENSDARG00000021343' => 'WD repeat and SOCS box-containing 1',
'ENSDARG00000025903' => 'lectin, galactoside-binding, soluble, 9 (galectin 9)-like 1',
'ENSDARG00000030025' => 'si:ch211-237d5.4',
'ENSDARG00000030933' => 'kinase suppressor of ras 1',
'ENSDARG00000032614' => 'musashi homolog 2b (Drosophila)',
'ENSDARG00000041060' => 'zgc:92326',
'ENSDARG00000054748' => 'CUE domain containing 1b',
'ENSDARG00000069058' => 'zgc:136924',
'ENSDARG00000087311' => 'zgc:171951',
'ENSDARG00000089444' => 'oligodendrocyte myelin glycoprotein b',
'ENSDARG00000093059' => 'si:ch211-209m20.9',
'ENSDARG00000097413' => 'si:ch211-237d5.5',
'ENSDARG00000097767' => 'si:ch211-209m20.6',
'ENSDARG00000098011' => 'si:ch211-209m20.7'
),
'gene_name_arr' => array(
'ENSG00000136450' => 'SRSF1',
'ENSG00000136451' => 'VEZF1',
'ENSG00000153944' => 'MSI2',
'ENSG00000166329' => 'CCDC182',
'ENSG00000180891' => 'CUEDC1',
'ENSG00000181610' => 'MRPS23',
'ENSG00000222976' => 'RN7SKP94',
'ENSG00000238447' => 'RNU7-134P',
'ENSG00000242889' => 'RN7SL449P',
'ENSG00000263499' => 'RP11-118E18.4',
'ENSG00000264112' => 'RP11-159D12.2',
'ENSG00000264914' => 'RP11-343K8.3',
'ENSG00000265542' => 'RP11-60A24.3',
'ENSG00000266086' => 'RP11-159D12.5',
'ENSG00000266100' => 'RP11-118E18.2',
'ENSG00000278285' => 'AC015883.1',
'ENSG00000278642' => 'RP11-159D12.11',
'ENSG00000279281' => 'RP11-226M10.3',
'ENSG00000280028' => 'RP11-118E18.1',
'ENSG00000280233' => 'RP11-159D12.3',
'ENSMUSG00000018377' => 'Vezf1',
'ENSMUSG00000018378' => 'Cuedc1',
'ENSMUSG00000018379' => 'Srsf1',
'ENSMUSG00000023723' => 'Mrps23',
'ENSMUSG00000034031' => '1700106J16Rik',
'ENSMUSG00000069769' => 'Msi2',
'ENSMUSG00000081304' => 'Gm11509',
'ENSMUSG00000084411' => 'Gm11510',
'ENSMUSG00000085246' => 'Gm15893',
'ENSMUSG00000087373' => 'Gm15892',
'ENSMUSG00000092985' => 'Mir378b',
'ENSDARG00000008247' => 'vezf1a',
'ENSDARG00000006062' => 'akap1b',
'ENSDARG00000012982' => 'nf1a',
'ENSDARG00000021343' => 'wsb1',
'ENSDARG00000025903' => 'lgals9l1',
'ENSDARG00000030025' => 'si:ch211-237d5.4',
'ENSDARG00000030933' => 'KSR1 (1 of 2)',
'ENSDARG00000032614' => 'msi2b',
'ENSDARG00000041060' => 'zgc:92326',
'ENSDARG00000054748' => 'cuedc1b',
'ENSDARG00000069058' => 'zgc:136924',
'ENSDARG00000087311' => 'zgc:171951',
'ENSDARG00000089444' => 'ogmb',
'ENSDARG00000093059' => 'si:ch211-209m20.9',
'ENSDARG00000097413' => 'si:ch211-237d5.5',
'ENSDARG00000097767' => 'si:ch211-209m20.6',
'ENSDARG00000098011' => 'si:ch211-209m20.7'
),
'accession_table' => array(
(int) 0 => array(
'region_elements' => array(
[maximum depth reached]
)
),
(int) 1 => array(
'region_elements' => array(
[maximum depth reached]
)
),
(int) 2 => array(
'region_elements' => array(
[maximum depth reached]
)
),
(int) 3 => array(
'region_elements' => array(
[maximum depth reached]
)
),
(int) 4 => array(
'region_elements' => array(
[maximum depth reached]
)
),
(int) 5 => array(
'region_elements' => array(
[maximum depth reached]
)
)
),
'all_tissues' => array(
(int) 0 => 'Adipose',
(int) 27 => 'Adrenal',
(int) 57 => 'Bladder',
(int) 85 => 'Brain',
(int) 138 => 'Breast',
(int) 174 => 'Colon',
(int) 208 => 'Heart',
(int) 263 => 'Kidney',
(int) 319 => 'Liver',
(int) 371 => 'Lung',
(int) 405 => 'Muscle',
(int) 449 => 'Ovary',
(int) 493 => 'Placenta',
(int) 531 => 'Testis'
),
'column_titles' => array(
(int) 0 => 'Region Sub-Accession',
(int) 1 => 'Tax ID',
(int) 2 => 'Position',
(int) 3 => 'Region Length'
),
'geneviewer' => array(
(int) 9606 => array(
'version' => 'GRCh38',
'coord_key' => 'Homo sapiens',
'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
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'start' => '88059066',
'end' => '88067476',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'Gm15892-001'
),
'ENSMUST00000175244' => array(
'start' => '88352773',
'end' => '88352864',
'transcript_biotype' => 'miRNA',
'transcript_name' => 'Mir378b-201'
),
'ENSDART00000029843' => array(
'start' => '38416889',
'end' => '38465277',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'vezf1a-201'
),
'ENSDART00000132162' => array(
'start' => '38416881',
'end' => '38459788',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'vezf1a-001'
),
'ENSDART00000025713' => array(
'start' => '30135828',
'end' => '30150773',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'akap1b-201'
),
'ENSDART00000112511' => array(
'start' => '30137947',
'end' => '30154790',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'akap1b-202'
),
'ENSDART00000134878' => array(
'start' => '30141941',
'end' => '30146715',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'akap1b-003'
),
'ENSDART00000136673' => array(
'start' => '30141660',
'end' => '30146134',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'akap1b-004'
),
'ENSDART00000138988' => array(
'start' => '30137945',
'end' => '30154902',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'akap1b-001'
),
'ENSDART00000080328' => array(
'start' => '30162058',
'end' => '30282109',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'nf1a-201'
),
'ENSDART00000154448' => array(
'start' => '30161547',
'end' => '30165146',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'nf1a-002'
),
'ENSDART00000157005' => array(
'start' => '30159199',
'end' => '30282356',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'nf1a-001'
),
'ENSDART00000008854' => array(
'start' => '30459335',
'end' => '30474876',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'wsb1-001'
),
'ENSDART00000147496' => array(
'start' => '30464247',
'end' => '30465063',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'wsb1-002'
),
'ENSDART00000048729' => array(
'start' => '30329810',
'end' => '30340735',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'lgals9l1-201'
),
'ENSDART00000100145' => array(
'start' => '30329807',
'end' => '30340735',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'lgals9l1-001'
),
'ENSDART00000060186' => array(
'start' => '30311255',
'end' => '30315246',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'si:ch211-237d5.4-201'
),
'ENSDART00000153779' => array(
'start' => '30311130',
'end' => '30315965',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'si:ch211-237d5.4-001'
),
'ENSDART00000048103' => array(
'start' => '30368968',
'end' => '30444600',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'KSR1 (1 of 2)-201'
),
'ENSDART00000154254' => array(
'start' => '30368155',
'end' => '30407312',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'KSR1 (1 of 2)-001'
),
'ENSDART00000155473' => array(
'start' => '30369960',
'end' => '30444853',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'KSR1 (1 of 2)-003'
),
'ENSDART00000157145' => array(
'start' => '30368155',
'end' => '30444853',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'KSR1 (1 of 2)-002'
),
'ENSDART00000050649' => array(
'start' => '29816615',
'end' => '30114000',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-005'
),
'ENSDART00000100194' => array(
'start' => '29805601',
'end' => '30114108',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-001'
),
'ENSDART00000136901' => array(
'start' => '30111191',
'end' => '30114066',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-012'
),
'ENSDART00000142827' => array(
'start' => '30111618',
'end' => '30114059',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'msi2b-013'
),
'ENSDART00000142982' => array(
'start' => '30112076',
'end' => '30113922',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-014'
),
'ENSDART00000145918' => array(
'start' => '29876177',
'end' => '30113499',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-015'
),
'ENSDART00000152330' => array(
'start' => '29991267',
'end' => '30130449',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-009'
),
'ENSDART00000152414' => array(
'start' => '29886444',
'end' => '30129723',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-011'
),
'ENSDART00000152790' => array(
'start' => '29991289',
'end' => '30129758',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-010'
),
'ENSDART00000154311' => array(
'start' => '29990944',
'end' => '30114026',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'msi2b-002'
),
'ENSDART00000154714' => array(
'start' => '29816580',
'end' => '30095098',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-004'
),
'ENSDART00000155212' => array(
'start' => '29806642',
'end' => '29886563',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-007'
),
'ENSDART00000156160' => array(
'start' => '29807108',
'end' => '30113378',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-008'
),
'ENSDART00000156584' => array(
'start' => '29806831',
'end' => '29831854',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-006'
),
'ENSDART00000156914' => array(
'start' => '29816613',
'end' => '30095086',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-003'
),
'ENSDART00000033380' => array(
'start' => '30351754',
'end' => '30364922',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'zgc:92326-201'
),
'ENSDART00000060157' => array(
'start' => '30351752',
'end' => '30365141',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'zgc:92326-001'
),
'ENSDART00000143372' => array(
'start' => '30360109',
'end' => '30364958',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'zgc:92326-002'
),
'ENSDART00000100108' => array(
'start' => '30480302',
'end' => '30510486',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'cuedc1b-201'
),
'ENSDART00000141788' => array(
'start' => '30503990',
'end' => '30534947',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'cuedc1b-002'
),
'ENSDART00000145255' => array(
'start' => '30485568',
'end' => '30534914',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'cuedc1b-001'
),
'ENSDART00000100185' => array(
'start' => '30319566',
'end' => '30324664',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'zgc:136924-001'
),
'ENSDART00000100183' => array(
'start' => '30292090',
'end' => '30297858',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'zgc:171951-001'
),
'ENSDART00000129474' => array(
'start' => '30214834',
'end' => '30219111',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'ogmb-001'
),
'ENSDART00000132493' => array(
'start' => '30285525',
'end' => '30287731',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'si:ch211-209m20.9-201'
),
'ENSDART00000155265' => array(
'start' => '30284966',
'end' => '30286912',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'si:ch211-209m20.9-001'
),
'ENSDART00000153607' => array(
'start' => '30303533',
'end' => '30310264',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'si:ch211-237d5.5-001'
),
'ENSDART00000154887' => array(
'start' => '30194274',
'end' => '30207730',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-209m20.6-001'
),
'ENSDART00000153754' => array(
'start' => '30220478',
'end' => '30221584',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-209m20.7-001'
)
),
'accession_map' => array(
'ENST000' => '9606',
'ENSMUST' => '10090',
'ENSDART' => '7955',
'ENSG000' => '9606',
'ENSMUSG' => '10090',
'ENSDARG' => '7955'
),
'sci_name_map' => array(
(int) 9606 => 'Homo_sapiens',
(int) 10090 => 'Mus_musculus',
(int) 7955 => 'Danio_rerio'
),
'UCSC_links' => array(
(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
),
'expressed_region_arr' => array(
'CIL_0007PL_0001' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007PL_0002' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007PL_0003' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007PL_0005' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
)
)
)
$region_arr = array(
'CIL_0007PL_0001' => array(
'genes_in_region' => array(
'ENSG00000136450' => array(
[maximum depth reached]
),
'ENSG00000136451' => array(
[maximum depth reached]
),
'ENSG00000153944' => array(
[maximum depth reached]
),
'ENSG00000166329' => array(
[maximum depth reached]
),
'ENSG00000181610' => array(
[maximum depth reached]
),
'ENSG00000222976' => array(
[maximum depth reached]
),
'ENSG00000242889' => array(
[maximum depth reached]
),
'ENSG00000263499' => array(
[maximum depth reached]
),
'ENSG00000264914' => array(
[maximum depth reached]
),
'ENSG00000265542' => array(
[maximum depth reached]
),
'ENSG00000266086' => array(
[maximum depth reached]
),
'ENSG00000266100' => array(
[maximum depth reached]
),
'ENSG00000278642' => array(
[maximum depth reached]
),
'ENSG00000279281' => array(
[maximum depth reached]
),
'ENSG00000280028' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Colon',
(int) 1 => 'Kidney',
(int) 2 => 'Lung',
(int) 3 => 'Muscle',
(int) 4 => 'Ovary',
(int) 5 => 'Placenta',
(int) 6 => 'Testis',
(int) 7 => 'Muscle',
(int) 8 => 'Heart',
(int) 9 => 'Liver',
(int) 10 => 'Adipose',
(int) 11 => 'Adrenal',
(int) 12 => 'Bladder',
(int) 13 => 'Brain',
(int) 14 => 'Breast',
(int) 15 => 'Colon',
(int) 16 => 'Heart',
(int) 17 => 'Kidney',
(int) 18 => 'Liver',
(int) 19 => 'Lung',
(int) 20 => 'Muscle',
(int) 21 => 'Ovary',
(int) 22 => 'Placenta',
(int) 23 => 'Testis',
(int) 24 => 'Adrenal',
(int) 25 => 'Breast',
(int) 26 => 'Colon',
(int) 27 => 'Kidney',
(int) 28 => 'Lung',
(int) 29 => 'Ovary',
(int) 30 => 'Placenta',
(int) 31 => 'Testis',
(int) 32 => 'Muscle',
(int) 33 => 'Adipose',
(int) 34 => 'Adrenal',
(int) 35 => 'Bladder',
(int) 36 => 'Breast',
(int) 37 => 'Colon',
(int) 38 => 'Heart',
(int) 39 => 'Kidney',
(int) 40 => 'Liver',
(int) 41 => 'Lung',
(int) 42 => 'Muscle',
(int) 43 => 'Ovary',
(int) 44 => 'Placenta',
(int) 45 => 'Testis',
(int) 46 => 'Breast',
(int) 47 => 'Colon',
(int) 48 => 'Heart',
(int) 49 => 'Liver',
(int) 50 => 'Adipose',
(int) 51 => 'Adrenal',
(int) 52 => 'Bladder',
(int) 53 => 'Brain',
(int) 54 => 'Breast',
(int) 55 => 'Colon',
(int) 56 => 'Heart',
(int) 57 => 'Kidney',
(int) 58 => 'Liver',
(int) 59 => 'Lung',
(int) 60 => 'Muscle',
(int) 61 => 'Ovary',
(int) 62 => 'Placenta',
(int) 63 => 'Testis',
(int) 64 => 'Bladder',
(int) 65 => 'Kidney',
(int) 66 => 'Bladder',
(int) 67 => 'Colon',
(int) 68 => 'Lung',
(int) 69 => 'Muscle',
(int) 70 => 'Ovary',
(int) 71 => 'Lung',
(int) 72 => 'Muscle',
(int) 73 => 'Adrenal',
(int) 74 => 'Lung',
(int) 75 => 'Ovary',
(int) 76 => 'Testis',
(int) 77 => 'Adipose',
(int) 78 => 'Breast',
(int) 79 => 'Heart',
(int) 80 => 'Kidney',
(int) 81 => 'Liver',
(int) 82 => 'Lung',
(int) 83 => 'Muscle',
(int) 84 => 'Muscle',
(int) 85 => 'Ovary',
(int) 86 => 'Bladder',
(int) 87 => 'Colon',
(int) 88 => 'Heart',
(int) 89 => 'Adipose',
(int) 90 => 'Bladder',
(int) 91 => 'Brain',
(int) 92 => 'Breast',
(int) 93 => 'Colon',
(int) 94 => 'Heart',
(int) 95 => 'Liver',
(int) 96 => 'Lung',
(int) 97 => 'Ovary',
(int) 98 => 'Placenta',
(int) 99 => 'Testis',
(int) 100 => 'Adrenal',
(int) 101 => 'Bladder',
(int) 102 => 'Brain',
(int) 103 => 'Breast',
(int) 104 => 'Colon',
(int) 105 => 'Kidney',
(int) 106 => 'Liver',
(int) 107 => 'Lung',
(int) 108 => 'Muscle',
(int) 109 => 'Placenta',
(int) 110 => 'Ovary',
(int) 111 => 'Placenta',
(int) 112 => 'Liver',
(int) 113 => 'Kidney',
(int) 114 => 'Adrenal',
(int) 115 => 'Kidney',
(int) 116 => 'Lung',
(int) 117 => 'Ovary',
(int) 118 => 'Testis',
(int) 119 => 'Adipose',
(int) 120 => 'Adrenal',
(int) 121 => 'Bladder',
(int) 122 => 'Brain',
(int) 123 => 'Breast',
(int) 124 => 'Colon',
(int) 125 => 'Heart',
(int) 126 => 'Kidney',
(int) 127 => 'Liver',
(int) 128 => 'Lung',
(int) 129 => 'Muscle',
(int) 130 => 'Ovary',
(int) 131 => 'Placenta',
(int) 132 => 'Testis',
(int) 133 => 'Adipose',
(int) 134 => 'Adrenal',
(int) 135 => 'Bladder',
(int) 136 => 'Brain',
(int) 137 => 'Breast',
(int) 138 => 'Colon',
(int) 139 => 'Heart',
(int) 140 => 'Kidney',
(int) 141 => 'Liver',
(int) 142 => 'Lung',
(int) 143 => 'Muscle',
(int) 144 => 'Ovary',
(int) 145 => 'Placenta',
(int) 146 => 'Testis',
(int) 147 => 'Colon',
(int) 148 => 'Muscle',
(int) 149 => 'Adipose',
(int) 150 => 'Adrenal',
(int) 151 => 'Breast',
(int) 152 => 'Heart',
(int) 153 => 'Kidney',
(int) 154 => 'Bladder',
(int) 155 => 'Brain',
(int) 156 => 'Colon',
(int) 157 => 'Heart',
(int) 158 => 'Liver',
(int) 159 => 'Lung',
(int) 160 => 'Muscle',
(int) 161 => 'Ovary',
(int) 162 => 'Placenta',
(int) 163 => 'Adrenal',
(int) 164 => 'Bladder',
(int) 165 => 'Brain',
(int) 166 => 'Breast',
(int) 167 => 'Colon',
(int) 168 => 'Heart',
(int) 169 => 'Kidney',
(int) 170 => 'Liver',
(int) 171 => 'Lung',
(int) 172 => 'Ovary',
(int) 173 => 'Testis',
(int) 174 => 'Brain',
(int) 175 => 'Adrenal',
(int) 176 => 'Breast',
(int) 177 => 'Brain',
(int) 178 => 'Colon',
(int) 179 => 'Heart',
(int) 180 => 'Ovary',
(int) 181 => 'Testis',
(int) 182 => 'Adipose',
(int) 183 => 'Adrenal',
(int) 184 => 'Bladder',
(int) 185 => 'Brain',
(int) 186 => 'Breast',
(int) 187 => 'Colon',
(int) 188 => 'Heart',
(int) 189 => 'Kidney',
(int) 190 => 'Ovary',
(int) 191 => 'Placenta',
(int) 192 => 'Testis',
(int) 193 => 'Brain',
(int) 194 => 'Heart',
(int) 195 => 'Kidney',
(int) 196 => 'Liver',
(int) 197 => 'Testis',
(int) 198 => 'Bladder',
(int) 199 => 'Brain',
(int) 200 => 'Breast',
(int) 201 => 'Colon',
(int) 202 => 'Heart',
(int) 203 => 'Kidney',
(int) 204 => 'Liver',
(int) 205 => 'Lung',
(int) 206 => 'Muscle',
(int) 207 => 'Ovary',
(int) 208 => 'Breast',
(int) 209 => 'Colon',
(int) 210 => 'Heart',
(int) 211 => 'Lung',
(int) 212 => 'Adrenal',
(int) 213 => 'Kidney',
(int) 214 => 'Adipose',
(int) 215 => 'Adrenal',
(int) 216 => 'Bladder',
(int) 217 => 'Brain',
(int) 218 => 'Breast',
(int) 219 => 'Colon',
(int) 220 => 'Heart',
(int) 221 => 'Kidney',
(int) 222 => 'Liver',
(int) 223 => 'Lung',
(int) 224 => 'Muscle',
(int) 225 => 'Ovary',
(int) 226 => 'Placenta',
(int) 227 => 'Testis',
(int) 228 => 'Adrenal',
(int) 229 => 'Bladder',
(int) 230 => 'Brain',
(int) 231 => 'Breast',
(int) 232 => 'Colon',
(int) 233 => 'Heart',
(int) 234 => 'Liver',
(int) 235 => 'Lung',
(int) 236 => 'Ovary',
(int) 237 => 'Placenta'
)
),
'CIL_0007PL_0002' => array(
'genes_in_region' => array(
'ENSMUSG00000018377' => array(
[maximum depth reached]
),
'ENSMUSG00000018378' => array(
[maximum depth reached]
),
'ENSMUSG00000018379' => array(
[maximum depth reached]
),
'ENSMUSG00000023723' => array(
[maximum depth reached]
),
'ENSMUSG00000034031' => array(
[maximum depth reached]
),
'ENSMUSG00000069769' => array(
[maximum depth reached]
),
'ENSMUSG00000081304' => array(
[maximum depth reached]
),
'ENSMUSG00000084411' => array(
[maximum depth reached]
),
'ENSMUSG00000085246' => array(
[maximum depth reached]
),
'ENSMUSG00000087373' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Adipose',
(int) 1 => 'Adrenal',
(int) 2 => 'Bladder',
(int) 3 => 'Brain',
(int) 4 => 'Breast',
(int) 5 => 'Colon',
(int) 6 => 'Heart',
(int) 7 => 'Kidney',
(int) 8 => 'Liver',
(int) 9 => 'Lung',
(int) 10 => 'Muscle',
(int) 11 => 'Ovary',
(int) 12 => 'Placenta',
(int) 13 => 'Testis',
(int) 14 => 'Brain',
(int) 15 => 'Breast',
(int) 16 => 'Heart',
(int) 17 => 'Liver',
(int) 18 => 'Ovary',
(int) 19 => 'Placenta',
(int) 20 => 'Testis',
(int) 21 => 'Adipose',
(int) 22 => 'Adrenal',
(int) 23 => 'Bladder',
(int) 24 => 'Brain',
(int) 25 => 'Breast',
(int) 26 => 'Colon',
(int) 27 => 'Heart',
(int) 28 => 'Kidney',
(int) 29 => 'Liver',
(int) 30 => 'Lung',
(int) 31 => 'Muscle',
(int) 32 => 'Ovary',
(int) 33 => 'Placenta',
(int) 34 => 'Testis',
(int) 35 => 'Placenta',
(int) 36 => 'Testis',
(int) 37 => 'Liver',
(int) 38 => 'Testis',
(int) 39 => 'Adipose',
(int) 40 => 'Bladder',
(int) 41 => 'Brain',
(int) 42 => 'Breast',
(int) 43 => 'Heart',
(int) 44 => 'Kidney',
(int) 45 => 'Liver',
(int) 46 => 'Lung',
(int) 47 => 'Muscle',
(int) 48 => 'Ovary',
(int) 49 => 'Placenta',
(int) 50 => 'Testis',
(int) 51 => 'Breast',
(int) 52 => 'Liver',
(int) 53 => 'Muscle',
(int) 54 => 'Adipose',
(int) 55 => 'Adrenal',
(int) 56 => 'Bladder',
(int) 57 => 'Brain',
(int) 58 => 'Breast',
(int) 59 => 'Colon',
(int) 60 => 'Heart',
(int) 61 => 'Kidney',
(int) 62 => 'Liver',
(int) 63 => 'Lung',
(int) 64 => 'Muscle',
(int) 65 => 'Ovary',
(int) 66 => 'Placenta',
(int) 67 => 'Testis',
(int) 68 => 'Adipose',
(int) 69 => 'Breast',
(int) 70 => 'Colon',
(int) 71 => 'Heart',
(int) 72 => 'Kidney',
(int) 73 => 'Liver',
(int) 74 => 'Lung',
(int) 75 => 'Ovary',
(int) 76 => 'Placenta',
(int) 77 => 'Testis',
(int) 78 => 'Bladder',
(int) 79 => 'Brain',
(int) 80 => 'Breast',
(int) 81 => 'Heart',
(int) 82 => 'Ovary',
(int) 83 => 'Placenta',
(int) 84 => 'Testis',
(int) 85 => 'Brain',
(int) 86 => 'Ovary',
(int) 87 => 'Placenta',
(int) 88 => 'Testis',
(int) 89 => 'Adipose',
(int) 90 => 'Adrenal',
(int) 91 => 'Bladder',
(int) 92 => 'Brain',
(int) 93 => 'Breast',
(int) 94 => 'Colon',
(int) 95 => 'Heart',
(int) 96 => 'Kidney',
(int) 97 => 'Liver',
(int) 98 => 'Lung',
(int) 99 => 'Muscle',
(int) 100 => 'Ovary',
(int) 101 => 'Placenta',
(int) 102 => 'Testis',
(int) 103 => 'Adipose',
(int) 104 => 'Adrenal',
(int) 105 => 'Breast',
(int) 106 => 'Colon',
(int) 107 => 'Kidney',
(int) 108 => 'Liver',
(int) 109 => 'Lung',
(int) 110 => 'Ovary',
(int) 111 => 'Brain',
(int) 112 => 'Ovary',
(int) 113 => 'Placenta',
(int) 114 => 'Testis',
(int) 115 => 'Adipose',
(int) 116 => 'Adrenal',
(int) 117 => 'Bladder',
(int) 118 => 'Brain',
(int) 119 => 'Breast',
(int) 120 => 'Colon',
(int) 121 => 'Heart',
(int) 122 => 'Kidney',
(int) 123 => 'Liver',
(int) 124 => 'Lung',
(int) 125 => 'Muscle',
(int) 126 => 'Ovary',
(int) 127 => 'Placenta',
(int) 128 => 'Testis',
(int) 129 => 'Adrenal',
(int) 130 => 'Liver',
(int) 131 => 'Ovary',
(int) 132 => 'Placenta',
(int) 133 => 'Testis',
(int) 134 => 'Adipose',
(int) 135 => 'Adrenal',
(int) 136 => 'Brain',
(int) 137 => 'Liver',
(int) 138 => 'Lung',
(int) 139 => 'Ovary',
(int) 140 => 'Testis',
(int) 141 => 'Placenta',
(int) 142 => 'Testis',
(int) 143 => 'Adipose',
(int) 144 => 'Adrenal',
(int) 145 => 'Brain',
(int) 146 => 'Breast',
(int) 147 => 'Colon',
(int) 148 => 'Kidney',
(int) 149 => 'Liver',
(int) 150 => 'Ovary',
(int) 151 => 'Placenta',
(int) 152 => 'Testis',
(int) 153 => 'Adipose',
(int) 154 => 'Adrenal',
(int) 155 => 'Brain',
(int) 156 => 'Kidney',
(int) 157 => 'Liver',
(int) 158 => 'Muscle',
(int) 159 => 'Ovary',
(int) 160 => 'Placenta',
(int) 161 => 'Testis',
(int) 162 => 'Adipose',
(int) 163 => 'Adrenal',
(int) 164 => 'Bladder',
(int) 165 => 'Brain',
(int) 166 => 'Breast',
(int) 167 => 'Colon',
(int) 168 => 'Heart',
(int) 169 => 'Kidney',
(int) 170 => 'Liver',
(int) 171 => 'Lung',
(int) 172 => 'Muscle',
(int) 173 => 'Ovary',
(int) 174 => 'Placenta',
(int) 175 => 'Testis',
(int) 176 => 'Adipose',
(int) 177 => 'Adrenal',
(int) 178 => 'Bladder',
(int) 179 => 'Brain',
(int) 180 => 'Breast',
(int) 181 => 'Colon',
(int) 182 => 'Heart',
(int) 183 => 'Kidney',
(int) 184 => 'Liver',
(int) 185 => 'Lung',
(int) 186 => 'Muscle',
(int) 187 => 'Ovary',
(int) 188 => 'Placenta',
(int) 189 => 'Testis',
(int) 190 => 'Testis',
(int) 191 => 'Bladder',
(int) 192 => 'Brain',
(int) 193 => 'Breast',
(int) 194 => 'Kidney',
(int) 195 => 'Liver',
(int) 196 => 'Ovary',
(int) 197 => 'Placenta',
(int) 198 => 'Testis',
(int) 199 => 'Bladder',
(int) 200 => 'Brain',
(int) 201 => 'Kidney',
(int) 202 => 'Muscle',
(int) 203 => 'Ovary',
(int) 204 => 'Placenta',
(int) 205 => 'Adipose',
(int) 206 => 'Adrenal',
(int) 207 => 'Bladder',
(int) 208 => 'Brain',
(int) 209 => 'Breast',
(int) 210 => 'Colon',
(int) 211 => 'Heart',
(int) 212 => 'Kidney',
(int) 213 => 'Liver',
(int) 214 => 'Lung',
(int) 215 => 'Muscle',
(int) 216 => 'Ovary',
(int) 217 => 'Placenta',
(int) 218 => 'Testis',
(int) 219 => 'Adipose',
(int) 220 => 'Brain',
(int) 221 => 'Breast',
(int) 222 => 'Colon',
(int) 223 => 'Kidney',
(int) 224 => 'Liver',
(int) 225 => 'Lung',
(int) 226 => 'Muscle',
(int) 227 => 'Ovary',
(int) 228 => 'Placenta',
(int) 229 => 'Testis',
(int) 230 => 'Adipose',
(int) 231 => 'Brain',
(int) 232 => 'Liver',
(int) 233 => 'Muscle',
(int) 234 => 'Ovary',
(int) 235 => 'Placenta',
(int) 236 => 'Testis',
(int) 237 => 'Adipose',
(int) 238 => 'Adrenal',
(int) 239 => 'Brain',
(int) 240 => 'Breast',
(int) 241 => 'Colon',
(int) 242 => 'Heart',
(int) 243 => 'Kidney',
(int) 244 => 'Liver',
(int) 245 => 'Lung',
(int) 246 => 'Muscle',
(int) 247 => 'Ovary',
(int) 248 => 'Placenta',
(int) 249 => 'Testis'
)
),
'CIL_0007PL_0003' => array(
'genes_in_region' => array(
'ENSDARG00000008247' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Brain',
(int) 1 => 'Heart',
(int) 2 => 'Kidney',
(int) 3 => 'Liver'
)
),
'CIL_0007PL_0005' => array(
'genes_in_region' => array(
'ENSDARG00000006062' => array(
[maximum depth reached]
),
'ENSDARG00000012982' => array(
[maximum depth reached]
),
'ENSDARG00000021343' => array(
[maximum depth reached]
),
'ENSDARG00000025903' => array(
[maximum depth reached]
),
'ENSDARG00000030025' => array(
[maximum depth reached]
),
'ENSDARG00000030933' => array(
[maximum depth reached]
),
'ENSDARG00000041060' => array(
[maximum depth reached]
),
'ENSDARG00000054748' => array(
[maximum depth reached]
),
'ENSDARG00000069058' => array(
[maximum depth reached]
),
'ENSDARG00000087311' => array(
[maximum depth reached]
),
'ENSDARG00000089444' => array(
[maximum depth reached]
),
'ENSDARG00000093059' => array(
[maximum depth reached]
),
'ENSDARG00000097767' => array(
[maximum depth reached]
),
'ENSDARG00000098011' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Brain',
(int) 1 => 'Heart',
(int) 2 => 'Kidney',
(int) 3 => 'Kidney',
(int) 4 => 'Kidney',
(int) 5 => 'Heart',
(int) 6 => 'Brain',
(int) 7 => 'Heart',
(int) 8 => 'Kidney',
(int) 9 => 'Liver',
(int) 10 => 'Muscle',
(int) 11 => 'Brain',
(int) 12 => 'Heart',
(int) 13 => 'Kidney',
(int) 14 => 'Liver',
(int) 15 => 'Muscle',
(int) 16 => 'Heart',
(int) 17 => 'Brain',
(int) 18 => 'Heart',
(int) 19 => 'Liver',
(int) 20 => 'Brain',
(int) 21 => 'Heart',
(int) 22 => 'Kidney',
(int) 23 => 'Liver',
(int) 24 => 'Muscle',
(int) 25 => 'Heart',
(int) 26 => 'Kidney',
(int) 27 => 'Kidney',
(int) 28 => 'Liver',
(int) 29 => 'Muscle',
(int) 30 => 'Brain',
(int) 31 => 'Heart',
(int) 32 => 'Brain',
(int) 33 => 'Heart',
(int) 34 => 'Kidney',
(int) 35 => 'Liver',
(int) 36 => 'Heart',
(int) 37 => 'Liver',
(int) 38 => 'Muscle',
(int) 39 => 'Kidney',
(int) 40 => 'Liver',
(int) 41 => 'Muscle',
(int) 42 => 'Kidney',
(int) 43 => 'Liver',
(int) 44 => 'Heart',
(int) 45 => 'Brain',
(int) 46 => 'Heart',
(int) 47 => 'Kidney',
(int) 48 => 'Brain',
(int) 49 => 'Heart',
(int) 50 => 'Kidney',
(int) 51 => 'Liver',
(int) 52 => 'Muscle',
(int) 53 => 'Brain',
(int) 54 => 'Heart',
(int) 55 => 'Kidney',
(int) 56 => 'Liver',
(int) 57 => 'Muscle',
(int) 58 => 'Heart',
(int) 59 => 'Liver',
(int) 60 => 'Brain',
(int) 61 => 'Heart',
(int) 62 => 'Kidney',
(int) 63 => 'Brain',
(int) 64 => 'Heart',
(int) 65 => 'Kidney',
(int) 66 => 'Muscle',
(int) 67 => 'Brain',
(int) 68 => 'Heart',
(int) 69 => 'Kidney',
(int) 70 => 'Muscle',
(int) 71 => 'Brain',
(int) 72 => 'Brain',
(int) 73 => 'Heart',
(int) 74 => 'Kidney',
(int) 75 => 'Muscle',
(int) 76 => 'Brain',
(int) 77 => 'Heart',
(int) 78 => 'Kidney',
(int) 79 => 'Muscle'
)
)
)
$gene_desc_arr = array(
'ENSG00000136450' => 'serine/arginine-rich splicing factor 1',
'ENSG00000136451' => 'vascular endothelial zinc finger 1',
'ENSG00000153944' => 'musashi RNA-binding protein 2',
'ENSG00000166329' => 'coiled-coil domain containing 182',
'ENSG00000180891' => 'CUE domain containing 1',
'ENSG00000181610' => 'mitochondrial ribosomal protein S23',
'ENSG00000222976' => 'RNA, 7SK small nuclear pseudogene 94',
'ENSG00000238447' => 'RNA, U7 small nuclear 134 pseudogene',
'ENSG00000242889' => 'RNA, 7SL, cytoplasmic 449, pseudogene',
'ENSG00000263499' => null,
'ENSG00000264112' => null,
'ENSG00000264914' => null,
'ENSG00000265542' => null,
'ENSG00000266086' => 'Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000463235}',
'ENSG00000266100' => null,
'ENSG00000278285' => null,
'ENSG00000278642' => null,
'ENSG00000279281' => null,
'ENSG00000280028' => null,
'ENSG00000280233' => null,
'ENSMUSG00000018377' => 'vascular endothelial zinc finger 1',
'ENSMUSG00000018378' => 'CUE domain containing 1',
'ENSMUSG00000018379' => 'serine/arginine-rich splicing factor 1',
'ENSMUSG00000023723' => 'mitochondrial ribosomal protein S23',
'ENSMUSG00000034031' => 'RIKEN cDNA 1700106J16 gene',
'ENSMUSG00000069769' => 'musashi RNA-binding protein 2',
'ENSMUSG00000081304' => 'predicted gene 11509',
'ENSMUSG00000084411' => 'predicted gene 11510',
'ENSMUSG00000085246' => 'predicted gene 15893',
'ENSMUSG00000087373' => 'predicted gene 15892',
'ENSMUSG00000092985' => 'microRNA 378b',
'ENSDARG00000008247' => 'vascular endothelial zinc finger 1a',
'ENSDARG00000006062' => 'A kinase (PRKA) anchor protein 1b',
'ENSDARG00000012982' => 'neurofibromin 1a',
'ENSDARG00000021343' => 'WD repeat and SOCS box-containing 1',
'ENSDARG00000025903' => 'lectin, galactoside-binding, soluble, 9 (galectin 9)-like 1',
'ENSDARG00000030025' => 'si:ch211-237d5.4',
'ENSDARG00000030933' => 'kinase suppressor of ras 1',
'ENSDARG00000032614' => 'musashi homolog 2b (Drosophila)',
'ENSDARG00000041060' => 'zgc:92326',
'ENSDARG00000054748' => 'CUE domain containing 1b',
'ENSDARG00000069058' => 'zgc:136924',
'ENSDARG00000087311' => 'zgc:171951',
'ENSDARG00000089444' => 'oligodendrocyte myelin glycoprotein b',
'ENSDARG00000093059' => 'si:ch211-209m20.9',
'ENSDARG00000097413' => 'si:ch211-237d5.5',
'ENSDARG00000097767' => 'si:ch211-209m20.6',
'ENSDARG00000098011' => 'si:ch211-209m20.7'
)
$gene_name_arr = array(
'ENSG00000136450' => 'SRSF1',
'ENSG00000136451' => 'VEZF1',
'ENSG00000153944' => 'MSI2',
'ENSG00000166329' => 'CCDC182',
'ENSG00000180891' => 'CUEDC1',
'ENSG00000181610' => 'MRPS23',
'ENSG00000222976' => 'RN7SKP94',
'ENSG00000238447' => 'RNU7-134P',
'ENSG00000242889' => 'RN7SL449P',
'ENSG00000263499' => 'RP11-118E18.4',
'ENSG00000264112' => 'RP11-159D12.2',
'ENSG00000264914' => 'RP11-343K8.3',
'ENSG00000265542' => 'RP11-60A24.3',
'ENSG00000266086' => 'RP11-159D12.5',
'ENSG00000266100' => 'RP11-118E18.2',
'ENSG00000278285' => 'AC015883.1',
'ENSG00000278642' => 'RP11-159D12.11',
'ENSG00000279281' => 'RP11-226M10.3',
'ENSG00000280028' => 'RP11-118E18.1',
'ENSG00000280233' => 'RP11-159D12.3',
'ENSMUSG00000018377' => 'Vezf1',
'ENSMUSG00000018378' => 'Cuedc1',
'ENSMUSG00000018379' => 'Srsf1',
'ENSMUSG00000023723' => 'Mrps23',
'ENSMUSG00000034031' => '1700106J16Rik',
'ENSMUSG00000069769' => 'Msi2',
'ENSMUSG00000081304' => 'Gm11509',
'ENSMUSG00000084411' => 'Gm11510',
'ENSMUSG00000085246' => 'Gm15893',
'ENSMUSG00000087373' => 'Gm15892',
'ENSMUSG00000092985' => 'Mir378b',
'ENSDARG00000008247' => 'vezf1a',
'ENSDARG00000006062' => 'akap1b',
'ENSDARG00000012982' => 'nf1a',
'ENSDARG00000021343' => 'wsb1',
'ENSDARG00000025903' => 'lgals9l1',
'ENSDARG00000030025' => 'si:ch211-237d5.4',
'ENSDARG00000030933' => 'KSR1 (1 of 2)',
'ENSDARG00000032614' => 'msi2b',
'ENSDARG00000041060' => 'zgc:92326',
'ENSDARG00000054748' => 'cuedc1b',
'ENSDARG00000069058' => 'zgc:136924',
'ENSDARG00000087311' => 'zgc:171951',
'ENSDARG00000089444' => 'ogmb',
'ENSDARG00000093059' => 'si:ch211-209m20.9',
'ENSDARG00000097413' => 'si:ch211-237d5.5',
'ENSDARG00000097767' => 'si:ch211-209m20.6',
'ENSDARG00000098011' => 'si:ch211-209m20.7'
)
$accession_table = array(
(int) 0 => array(
'region_elements' => array(
'region_element_id' => 'CIL_0007PL_0001',
'tax_id' => '9606',
'chromosome' => '17',
'seq_start' => '57406597',
'seq_end' => '58005077',
'region_length' => '598480',
'region_type' => 'UCNEbase',
'el_id' => 'MSI2'
)
),
(int) 1 => array(
'region_elements' => array(
'region_element_id' => 'CIL_0007PL_0002',
'tax_id' => '10090',
'chromosome' => '11',
'seq_start' => '88049942',
'seq_end' => '88585488',
'region_length' => '535546',
'region_type' => 'UCNEbase',
'el_id' => 'MSI2'
)
),
(int) 2 => array(
'region_elements' => array(
'region_element_id' => 'CIL_0007PL_0003',
'tax_id' => '7955',
'chromosome' => '10',
'seq_start' => '38465073',
'seq_end' => '38465300',
'region_length' => '227',
'region_type' => 'UCNEbase',
'el_id' => 'MSI2'
)
),
(int) 3 => array(
'region_elements' => array(
'region_element_id' => 'CIL_0007PL_0004',
'tax_id' => '7955',
'chromosome' => '15',
'seq_start' => '15091427',
'seq_end' => '15091590',
'region_length' => '163',
'region_type' => 'UCNEbase',
'el_id' => 'MSI2'
)
),
(int) 4 => array(
'region_elements' => array(
'region_element_id' => 'CIL_0007PL_0005',
'tax_id' => '7955',
'chromosome' => '15',
'seq_start' => '30091498',
'seq_end' => '30537230',
'region_length' => '445732',
'region_type' => 'UCNEbase',
'el_id' => 'MSI2'
)
),
(int) 5 => array(
'region_elements' => array(
'region_element_id' => 'CIL_0007PL_0006',
'tax_id' => '7955',
'chromosome' => '21',
'seq_start' => '38404226',
'seq_end' => '38405181',
'region_length' => '955',
'region_type' => 'UCNEbase',
'el_id' => 'MSI2'
)
)
)
$all_tissues = array(
(int) 0 => 'Adipose',
(int) 27 => 'Adrenal',
(int) 57 => 'Bladder',
(int) 85 => 'Brain',
(int) 138 => 'Breast',
(int) 174 => 'Colon',
(int) 208 => 'Heart',
(int) 263 => 'Kidney',
(int) 319 => 'Liver',
(int) 371 => 'Lung',
(int) 405 => 'Muscle',
(int) 449 => 'Ovary',
(int) 493 => 'Placenta',
(int) 531 => 'Testis'
)
$column_titles = array(
(int) 0 => 'Region Sub-Accession',
(int) 1 => 'Tax ID',
(int) 2 => 'Position',
(int) 3 => 'Region Length'
)
$geneviewer = array(
(int) 9606 => array(
'version' => 'GRCh38',
'coord_key' => 'Homo sapiens',
'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
'desc' => 'Gene structures from GENCODE 19',
'twoBitURI' => '/static/files/GRCh38.2bit',
'bwgURI' => '/static/files/GRCh38.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
),
(int) 10090 => array(
'version' => 'GRCm38',
'coord_key' => 'Mus musculus',
'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
'desc' => 'Gene structures from GENCODE 19',
'twoBitURI' => '/static/files/GRCm38.2bit',
'bwgURI' => '/static/files/GRCm38.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
),
(int) 7955 => array(
'version' => 'Zv9',
'coord_key' => 'Danio rerio',
'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
'twoBitURI' => '/static/files/Zv9.2bit',
'bwgURI' => '/static/files/Zv9.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
)
)
$transcript_count = (int) 153
$longest_tissue_len = (int) 8
$transcript_data = array(
'ENST00000258962' => array(
'start' => '58004849',
'end' => '58007346',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'SRSF1-001'
),
'ENST00000578430' => array(
'start' => '58006242',
'end' => '58007346',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'SRSF1-007'
),
'ENST00000581497' => array(
'start' => '58003493',
'end' => '58005134',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'SRSF1-009'
),
'ENST00000581979' => array(
'start' => '58003807',
'end' => '58007232',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'SRSF1-004'
),
'ENST00000582730' => array(
'start' => '58003360',
'end' => '58007261',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'SRSF1-003'
),
'ENST00000583741' => array(
'start' => '58004849',
'end' => '58007261',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'SRSF1-005'
),
'ENST00000584668' => array(
'start' => '58003802',
'end' => '58006405',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'SRSF1-008'
),
'ENST00000584773' => array(
'start' => '58004588',
'end' => '58007261',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'SRSF1-002'
),
'ENST00000585096' => array(
'start' => '58004822',
'end' => '58007273',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'SRSF1-006'
),
'ENST00000258963' => array(
'start' => '57971547',
'end' => '57982864',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'VEZF1-005'
),
'ENST00000581208' => array(
'start' => '57973759',
'end' => '57988152',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'VEZF1-001'
),
'ENST00000583932' => array(
'start' => '57982910',
'end' => '57988259',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'VEZF1-004'
),
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),
'ENSDART00000050649' => array(
'start' => '29816615',
'end' => '30114000',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-005'
),
'ENSDART00000100194' => array(
'start' => '29805601',
'end' => '30114108',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-001'
),
'ENSDART00000136901' => array(
'start' => '30111191',
'end' => '30114066',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-012'
),
'ENSDART00000142827' => array(
'start' => '30111618',
'end' => '30114059',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'msi2b-013'
),
'ENSDART00000142982' => array(
'start' => '30112076',
'end' => '30113922',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-014'
),
'ENSDART00000145918' => array(
'start' => '29876177',
'end' => '30113499',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-015'
),
'ENSDART00000152330' => array(
'start' => '29991267',
'end' => '30130449',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-009'
),
'ENSDART00000152414' => array(
'start' => '29886444',
'end' => '30129723',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-011'
),
'ENSDART00000152790' => array(
'start' => '29991289',
'end' => '30129758',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-010'
),
'ENSDART00000154311' => array(
'start' => '29990944',
'end' => '30114026',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'msi2b-002'
),
'ENSDART00000154714' => array(
'start' => '29816580',
'end' => '30095098',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-004'
),
'ENSDART00000155212' => array(
'start' => '29806642',
'end' => '29886563',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-007'
),
'ENSDART00000156160' => array(
'start' => '29807108',
'end' => '30113378',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-008'
),
'ENSDART00000156584' => array(
'start' => '29806831',
'end' => '29831854',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-006'
),
'ENSDART00000156914' => array(
'start' => '29816613',
'end' => '30095086',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'msi2b-003'
),
'ENSDART00000033380' => array(
'start' => '30351754',
'end' => '30364922',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'zgc:92326-201'
),
'ENSDART00000060157' => array(
'start' => '30351752',
'end' => '30365141',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'zgc:92326-001'
),
'ENSDART00000143372' => array(
'start' => '30360109',
'end' => '30364958',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'zgc:92326-002'
),
'ENSDART00000100108' => array(
'start' => '30480302',
'end' => '30510486',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'cuedc1b-201'
),
'ENSDART00000141788' => array(
'start' => '30503990',
'end' => '30534947',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'cuedc1b-002'
),
'ENSDART00000145255' => array(
'start' => '30485568',
'end' => '30534914',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'cuedc1b-001'
),
'ENSDART00000100185' => array(
'start' => '30319566',
'end' => '30324664',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'zgc:136924-001'
),
'ENSDART00000100183' => array(
'start' => '30292090',
'end' => '30297858',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'zgc:171951-001'
),
'ENSDART00000129474' => array(
'start' => '30214834',
'end' => '30219111',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'ogmb-001'
),
'ENSDART00000132493' => array(
'start' => '30285525',
'end' => '30287731',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'si:ch211-209m20.9-201'
),
'ENSDART00000155265' => array(
'start' => '30284966',
'end' => '30286912',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'si:ch211-209m20.9-001'
),
'ENSDART00000153607' => array(
'start' => '30303533',
'end' => '30310264',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'si:ch211-237d5.5-001'
),
'ENSDART00000154887' => array(
'start' => '30194274',
'end' => '30207730',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-209m20.6-001'
),
'ENSDART00000153754' => array(
'start' => '30220478',
'end' => '30221584',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-209m20.7-001'
)
)
$accession_map = array(
'ENST000' => '9606',
'ENSMUST' => '10090',
'ENSDART' => '7955',
'ENSG000' => '9606',
'ENSMUSG' => '10090',
'ENSDARG' => '7955'
)
$sci_name_map = array(
(int) 9606 => 'Homo_sapiens',
(int) 10090 => 'Mus_musculus',
(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
'CIL_0007PL_0001' => array(
'genes_in_region' => array(
'ENSG00000136450' => array(
[maximum depth reached]
),
'ENSG00000136451' => array(
[maximum depth reached]
),
'ENSG00000153944' => array(
[maximum depth reached]
),
'ENSG00000166329' => array(
[maximum depth reached]
),
'ENSG00000181610' => array(
[maximum depth reached]
),
'ENSG00000222976' => array(
[maximum depth reached]
),
'ENSG00000242889' => array(
[maximum depth reached]
),
'ENSG00000263499' => array(
[maximum depth reached]
),
'ENSG00000264914' => array(
[maximum depth reached]
),
'ENSG00000265542' => array(
[maximum depth reached]
),
'ENSG00000266086' => array(
[maximum depth reached]
),
'ENSG00000266100' => array(
[maximum depth reached]
),
'ENSG00000278642' => array(
[maximum depth reached]
),
'ENSG00000279281' => array(
[maximum depth reached]
),
'ENSG00000280028' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Colon',
(int) 1 => 'Kidney',
(int) 2 => 'Lung',
(int) 3 => 'Muscle',
(int) 4 => 'Ovary',
(int) 5 => 'Placenta',
(int) 6 => 'Testis',
(int) 7 => 'Muscle',
(int) 8 => 'Heart',
(int) 9 => 'Liver',
(int) 10 => 'Adipose',
(int) 11 => 'Adrenal',
(int) 12 => 'Bladder',
(int) 13 => 'Brain',
(int) 14 => 'Breast',
(int) 15 => 'Colon',
(int) 16 => 'Heart',
(int) 17 => 'Kidney',
(int) 18 => 'Liver',
(int) 19 => 'Lung',
(int) 20 => 'Muscle',
(int) 21 => 'Ovary',
(int) 22 => 'Placenta',
(int) 23 => 'Testis',
(int) 24 => 'Adrenal',
(int) 25 => 'Breast',
(int) 26 => 'Colon',
(int) 27 => 'Kidney',
(int) 28 => 'Lung',
(int) 29 => 'Ovary',
(int) 30 => 'Placenta',
(int) 31 => 'Testis',
(int) 32 => 'Muscle',
(int) 33 => 'Adipose',
(int) 34 => 'Adrenal',
(int) 35 => 'Bladder',
(int) 36 => 'Breast',
(int) 37 => 'Colon',
(int) 38 => 'Heart',
(int) 39 => 'Kidney',
(int) 40 => 'Liver',
(int) 41 => 'Lung',
(int) 42 => 'Muscle',
(int) 43 => 'Ovary',
(int) 44 => 'Placenta',
(int) 45 => 'Testis',
(int) 46 => 'Breast',
(int) 47 => 'Colon',
(int) 48 => 'Heart',
(int) 49 => 'Liver',
(int) 50 => 'Adipose',
(int) 51 => 'Adrenal',
(int) 52 => 'Bladder',
(int) 53 => 'Brain',
(int) 54 => 'Breast',
(int) 55 => 'Colon',
(int) 56 => 'Heart',
(int) 57 => 'Kidney',
(int) 58 => 'Liver',
(int) 59 => 'Lung',
(int) 60 => 'Muscle',
(int) 61 => 'Ovary',
(int) 62 => 'Placenta',
(int) 63 => 'Testis',
(int) 64 => 'Bladder',
(int) 65 => 'Kidney',
(int) 66 => 'Bladder',
(int) 67 => 'Colon',
(int) 68 => 'Lung',
(int) 69 => 'Muscle',
(int) 70 => 'Ovary',
(int) 71 => 'Lung',
(int) 72 => 'Muscle',
(int) 73 => 'Adrenal',
(int) 74 => 'Lung',
(int) 75 => 'Ovary',
(int) 76 => 'Testis',
(int) 77 => 'Adipose',
(int) 78 => 'Breast',
(int) 79 => 'Heart',
(int) 80 => 'Kidney',
(int) 81 => 'Liver',
(int) 82 => 'Lung',
(int) 83 => 'Muscle',
(int) 84 => 'Muscle',
(int) 85 => 'Ovary',
(int) 86 => 'Bladder',
(int) 87 => 'Colon',
(int) 88 => 'Heart',
(int) 89 => 'Adipose',
(int) 90 => 'Bladder',
(int) 91 => 'Brain',
(int) 92 => 'Breast',
(int) 93 => 'Colon',
(int) 94 => 'Heart',
(int) 95 => 'Liver',
(int) 96 => 'Lung',
(int) 97 => 'Ovary',
(int) 98 => 'Placenta',
(int) 99 => 'Testis',
(int) 100 => 'Adrenal',
(int) 101 => 'Bladder',
(int) 102 => 'Brain',
(int) 103 => 'Breast',
(int) 104 => 'Colon',
(int) 105 => 'Kidney',
(int) 106 => 'Liver',
(int) 107 => 'Lung',
(int) 108 => 'Muscle',
(int) 109 => 'Placenta',
(int) 110 => 'Ovary',
(int) 111 => 'Placenta',
(int) 112 => 'Liver',
(int) 113 => 'Kidney',
(int) 114 => 'Adrenal',
(int) 115 => 'Kidney',
(int) 116 => 'Lung',
(int) 117 => 'Ovary',
(int) 118 => 'Testis',
(int) 119 => 'Adipose',
(int) 120 => 'Adrenal',
(int) 121 => 'Bladder',
(int) 122 => 'Brain',
(int) 123 => 'Breast',
(int) 124 => 'Colon',
(int) 125 => 'Heart',
(int) 126 => 'Kidney',
(int) 127 => 'Liver',
(int) 128 => 'Lung',
(int) 129 => 'Muscle',
(int) 130 => 'Ovary',
(int) 131 => 'Placenta',
(int) 132 => 'Testis',
(int) 133 => 'Adipose',
(int) 134 => 'Adrenal',
(int) 135 => 'Bladder',
(int) 136 => 'Brain',
(int) 137 => 'Breast',
(int) 138 => 'Colon',
(int) 139 => 'Heart',
(int) 140 => 'Kidney',
(int) 141 => 'Liver',
(int) 142 => 'Lung',
(int) 143 => 'Muscle',
(int) 144 => 'Ovary',
(int) 145 => 'Placenta',
(int) 146 => 'Testis',
(int) 147 => 'Colon',
(int) 148 => 'Muscle',
(int) 149 => 'Adipose',
(int) 150 => 'Adrenal',
(int) 151 => 'Breast',
(int) 152 => 'Heart',
(int) 153 => 'Kidney',
(int) 154 => 'Bladder',
(int) 155 => 'Brain',
(int) 156 => 'Colon',
(int) 157 => 'Heart',
(int) 158 => 'Liver',
(int) 159 => 'Lung',
(int) 160 => 'Muscle',
(int) 161 => 'Ovary',
(int) 162 => 'Placenta',
(int) 163 => 'Adrenal',
(int) 164 => 'Bladder',
(int) 165 => 'Brain',
(int) 166 => 'Breast',
(int) 167 => 'Colon',
(int) 168 => 'Heart',
(int) 169 => 'Kidney',
(int) 170 => 'Liver',
(int) 171 => 'Lung',
(int) 172 => 'Ovary',
(int) 173 => 'Testis',
(int) 174 => 'Brain',
(int) 175 => 'Adrenal',
(int) 176 => 'Breast',
(int) 177 => 'Brain',
(int) 178 => 'Colon',
(int) 179 => 'Heart',
(int) 180 => 'Ovary',
(int) 181 => 'Testis',
(int) 182 => 'Adipose',
(int) 183 => 'Adrenal',
(int) 184 => 'Bladder',
(int) 185 => 'Brain',
(int) 186 => 'Breast',
(int) 187 => 'Colon',
(int) 188 => 'Heart',
(int) 189 => 'Kidney',
(int) 190 => 'Ovary',
(int) 191 => 'Placenta',
(int) 192 => 'Testis',
(int) 193 => 'Brain',
(int) 194 => 'Heart',
(int) 195 => 'Kidney',
(int) 196 => 'Liver',
(int) 197 => 'Testis',
(int) 198 => 'Bladder',
(int) 199 => 'Brain',
(int) 200 => 'Breast',
(int) 201 => 'Colon',
(int) 202 => 'Heart',
(int) 203 => 'Kidney',
(int) 204 => 'Liver',
(int) 205 => 'Lung',
(int) 206 => 'Muscle',
(int) 207 => 'Ovary',
(int) 208 => 'Breast',
(int) 209 => 'Colon',
(int) 210 => 'Heart',
(int) 211 => 'Lung',
(int) 212 => 'Adrenal',
(int) 213 => 'Kidney',
(int) 214 => 'Adipose',
(int) 215 => 'Adrenal',
(int) 216 => 'Bladder',
(int) 217 => 'Brain',
(int) 218 => 'Breast',
(int) 219 => 'Colon',
(int) 220 => 'Heart',
(int) 221 => 'Kidney',
(int) 222 => 'Liver',
(int) 223 => 'Lung',
(int) 224 => 'Muscle',
(int) 225 => 'Ovary',
(int) 226 => 'Placenta',
(int) 227 => 'Testis',
(int) 228 => 'Adrenal',
(int) 229 => 'Bladder',
(int) 230 => 'Brain',
(int) 231 => 'Breast',
(int) 232 => 'Colon',
(int) 233 => 'Heart',
(int) 234 => 'Liver',
(int) 235 => 'Lung',
(int) 236 => 'Ovary',
(int) 237 => 'Placenta'
)
),
'CIL_0007PL_0002' => array(
'genes_in_region' => array(
'ENSMUSG00000018377' => array(
[maximum depth reached]
),
'ENSMUSG00000018378' => array(
[maximum depth reached]
),
'ENSMUSG00000018379' => array(
[maximum depth reached]
),
'ENSMUSG00000023723' => array(
[maximum depth reached]
),
'ENSMUSG00000034031' => array(
[maximum depth reached]
),
'ENSMUSG00000069769' => array(
[maximum depth reached]
),
'ENSMUSG00000081304' => array(
[maximum depth reached]
),
'ENSMUSG00000084411' => array(
[maximum depth reached]
),
'ENSMUSG00000085246' => array(
[maximum depth reached]
),
'ENSMUSG00000087373' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Adipose',
(int) 1 => 'Adrenal',
(int) 2 => 'Bladder',
(int) 3 => 'Brain',
(int) 4 => 'Breast',
(int) 5 => 'Colon',
(int) 6 => 'Heart',
(int) 7 => 'Kidney',
(int) 8 => 'Liver',
(int) 9 => 'Lung',
(int) 10 => 'Muscle',
(int) 11 => 'Ovary',
(int) 12 => 'Placenta',
(int) 13 => 'Testis',
(int) 14 => 'Brain',
(int) 15 => 'Breast',
(int) 16 => 'Heart',
(int) 17 => 'Liver',
(int) 18 => 'Ovary',
(int) 19 => 'Placenta',
(int) 20 => 'Testis',
(int) 21 => 'Adipose',
(int) 22 => 'Adrenal',
(int) 23 => 'Bladder',
(int) 24 => 'Brain',
(int) 25 => 'Breast',
(int) 26 => 'Colon',
(int) 27 => 'Heart',
(int) 28 => 'Kidney',
(int) 29 => 'Liver',
(int) 30 => 'Lung',
(int) 31 => 'Muscle',
(int) 32 => 'Ovary',
(int) 33 => 'Placenta',
(int) 34 => 'Testis',
(int) 35 => 'Placenta',
(int) 36 => 'Testis',
(int) 37 => 'Liver',
(int) 38 => 'Testis',
(int) 39 => 'Adipose',
(int) 40 => 'Bladder',
(int) 41 => 'Brain',
(int) 42 => 'Breast',
(int) 43 => 'Heart',
(int) 44 => 'Kidney',
(int) 45 => 'Liver',
(int) 46 => 'Lung',
(int) 47 => 'Muscle',
(int) 48 => 'Ovary',
(int) 49 => 'Placenta',
(int) 50 => 'Testis',
(int) 51 => 'Breast',
(int) 52 => 'Liver',
(int) 53 => 'Muscle',
(int) 54 => 'Adipose',
(int) 55 => 'Adrenal',
(int) 56 => 'Bladder',
(int) 57 => 'Brain',
(int) 58 => 'Breast',
(int) 59 => 'Colon',
(int) 60 => 'Heart',
(int) 61 => 'Kidney',
(int) 62 => 'Liver',
(int) 63 => 'Lung',
(int) 64 => 'Muscle',
(int) 65 => 'Ovary',
(int) 66 => 'Placenta',
(int) 67 => 'Testis',
(int) 68 => 'Adipose',
(int) 69 => 'Breast',
(int) 70 => 'Colon',
(int) 71 => 'Heart',
(int) 72 => 'Kidney',
(int) 73 => 'Liver',
(int) 74 => 'Lung',
(int) 75 => 'Ovary',
(int) 76 => 'Placenta',
(int) 77 => 'Testis',
(int) 78 => 'Bladder',
(int) 79 => 'Brain',
(int) 80 => 'Breast',
(int) 81 => 'Heart',
(int) 82 => 'Ovary',
(int) 83 => 'Placenta',
(int) 84 => 'Testis',
(int) 85 => 'Brain',
(int) 86 => 'Ovary',
(int) 87 => 'Placenta',
(int) 88 => 'Testis',
(int) 89 => 'Adipose',
(int) 90 => 'Adrenal',
(int) 91 => 'Bladder',
(int) 92 => 'Brain',
(int) 93 => 'Breast',
(int) 94 => 'Colon',
(int) 95 => 'Heart',
(int) 96 => 'Kidney',
(int) 97 => 'Liver',
(int) 98 => 'Lung',
(int) 99 => 'Muscle',
(int) 100 => 'Ovary',
(int) 101 => 'Placenta',
(int) 102 => 'Testis',
(int) 103 => 'Adipose',
(int) 104 => 'Adrenal',
(int) 105 => 'Breast',
(int) 106 => 'Colon',
(int) 107 => 'Kidney',
(int) 108 => 'Liver',
(int) 109 => 'Lung',
(int) 110 => 'Ovary',
(int) 111 => 'Brain',
(int) 112 => 'Ovary',
(int) 113 => 'Placenta',
(int) 114 => 'Testis',
(int) 115 => 'Adipose',
(int) 116 => 'Adrenal',
(int) 117 => 'Bladder',
(int) 118 => 'Brain',
(int) 119 => 'Breast',
(int) 120 => 'Colon',
(int) 121 => 'Heart',
(int) 122 => 'Kidney',
(int) 123 => 'Liver',
(int) 124 => 'Lung',
(int) 125 => 'Muscle',
(int) 126 => 'Ovary',
(int) 127 => 'Placenta',
(int) 128 => 'Testis',
(int) 129 => 'Adrenal',
(int) 130 => 'Liver',
(int) 131 => 'Ovary',
(int) 132 => 'Placenta',
(int) 133 => 'Testis',
(int) 134 => 'Adipose',
(int) 135 => 'Adrenal',
(int) 136 => 'Brain',
(int) 137 => 'Liver',
(int) 138 => 'Lung',
(int) 139 => 'Ovary',
(int) 140 => 'Testis',
(int) 141 => 'Placenta',
(int) 142 => 'Testis',
(int) 143 => 'Adipose',
(int) 144 => 'Adrenal',
(int) 145 => 'Brain',
(int) 146 => 'Breast',
(int) 147 => 'Colon',
(int) 148 => 'Kidney',
(int) 149 => 'Liver',
(int) 150 => 'Ovary',
(int) 151 => 'Placenta',
(int) 152 => 'Testis',
(int) 153 => 'Adipose',
(int) 154 => 'Adrenal',
(int) 155 => 'Brain',
(int) 156 => 'Kidney',
(int) 157 => 'Liver',
(int) 158 => 'Muscle',
(int) 159 => 'Ovary',
(int) 160 => 'Placenta',
(int) 161 => 'Testis',
(int) 162 => 'Adipose',
(int) 163 => 'Adrenal',
(int) 164 => 'Bladder',
(int) 165 => 'Brain',
(int) 166 => 'Breast',
(int) 167 => 'Colon',
(int) 168 => 'Heart',
(int) 169 => 'Kidney',
(int) 170 => 'Liver',
(int) 171 => 'Lung',
(int) 172 => 'Muscle',
(int) 173 => 'Ovary',
(int) 174 => 'Placenta',
(int) 175 => 'Testis',
(int) 176 => 'Adipose',
(int) 177 => 'Adrenal',
(int) 178 => 'Bladder',
(int) 179 => 'Brain',
(int) 180 => 'Breast',
(int) 181 => 'Colon',
(int) 182 => 'Heart',
(int) 183 => 'Kidney',
(int) 184 => 'Liver',
(int) 185 => 'Lung',
(int) 186 => 'Muscle',
(int) 187 => 'Ovary',
(int) 188 => 'Placenta',
(int) 189 => 'Testis',
(int) 190 => 'Testis',
(int) 191 => 'Bladder',
(int) 192 => 'Brain',
(int) 193 => 'Breast',
(int) 194 => 'Kidney',
(int) 195 => 'Liver',
(int) 196 => 'Ovary',
(int) 197 => 'Placenta',
(int) 198 => 'Testis',
(int) 199 => 'Bladder',
(int) 200 => 'Brain',
(int) 201 => 'Kidney',
(int) 202 => 'Muscle',
(int) 203 => 'Ovary',
(int) 204 => 'Placenta',
(int) 205 => 'Adipose',
(int) 206 => 'Adrenal',
(int) 207 => 'Bladder',
(int) 208 => 'Brain',
(int) 209 => 'Breast',
(int) 210 => 'Colon',
(int) 211 => 'Heart',
(int) 212 => 'Kidney',
(int) 213 => 'Liver',
(int) 214 => 'Lung',
(int) 215 => 'Muscle',
(int) 216 => 'Ovary',
(int) 217 => 'Placenta',
(int) 218 => 'Testis',
(int) 219 => 'Adipose',
(int) 220 => 'Brain',
(int) 221 => 'Breast',
(int) 222 => 'Colon',
(int) 223 => 'Kidney',
(int) 224 => 'Liver',
(int) 225 => 'Lung',
(int) 226 => 'Muscle',
(int) 227 => 'Ovary',
(int) 228 => 'Placenta',
(int) 229 => 'Testis',
(int) 230 => 'Adipose',
(int) 231 => 'Brain',
(int) 232 => 'Liver',
(int) 233 => 'Muscle',
(int) 234 => 'Ovary',
(int) 235 => 'Placenta',
(int) 236 => 'Testis',
(int) 237 => 'Adipose',
(int) 238 => 'Adrenal',
(int) 239 => 'Brain',
(int) 240 => 'Breast',
(int) 241 => 'Colon',
(int) 242 => 'Heart',
(int) 243 => 'Kidney',
(int) 244 => 'Liver',
(int) 245 => 'Lung',
(int) 246 => 'Muscle',
(int) 247 => 'Ovary',
(int) 248 => 'Placenta',
(int) 249 => 'Testis'
)
),
'CIL_0007PL_0003' => array(
'genes_in_region' => array(
'ENSDARG00000008247' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Brain',
(int) 1 => 'Heart',
(int) 2 => 'Kidney',
(int) 3 => 'Liver'
)
),
'CIL_0007PL_0005' => array(
'genes_in_region' => array(
'ENSDARG00000006062' => array(
[maximum depth reached]
),
'ENSDARG00000012982' => array(
[maximum depth reached]
),
'ENSDARG00000021343' => array(
[maximum depth reached]
),
'ENSDARG00000025903' => array(
[maximum depth reached]
),
'ENSDARG00000030025' => array(
[maximum depth reached]
),
'ENSDARG00000030933' => array(
[maximum depth reached]
),
'ENSDARG00000041060' => array(
[maximum depth reached]
),
'ENSDARG00000054748' => array(
[maximum depth reached]
),
'ENSDARG00000069058' => array(
[maximum depth reached]
),
'ENSDARG00000087311' => array(
[maximum depth reached]
),
'ENSDARG00000089444' => array(
[maximum depth reached]
),
'ENSDARG00000093059' => array(
[maximum depth reached]
),
'ENSDARG00000097767' => array(
[maximum depth reached]
),
'ENSDARG00000098011' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Brain',
(int) 1 => 'Heart',
(int) 2 => 'Kidney',
(int) 3 => 'Kidney',
(int) 4 => 'Kidney',
(int) 5 => 'Heart',
(int) 6 => 'Brain',
(int) 7 => 'Heart',
(int) 8 => 'Kidney',
(int) 9 => 'Liver',
(int) 10 => 'Muscle',
(int) 11 => 'Brain',
(int) 12 => 'Heart',
(int) 13 => 'Kidney',
(int) 14 => 'Liver',
(int) 15 => 'Muscle',
(int) 16 => 'Heart',
(int) 17 => 'Brain',
(int) 18 => 'Heart',
(int) 19 => 'Liver',
(int) 20 => 'Brain',
(int) 21 => 'Heart',
(int) 22 => 'Kidney',
(int) 23 => 'Liver',
(int) 24 => 'Muscle',
(int) 25 => 'Heart',
(int) 26 => 'Kidney',
(int) 27 => 'Kidney',
(int) 28 => 'Liver',
(int) 29 => 'Muscle',
(int) 30 => 'Brain',
(int) 31 => 'Heart',
(int) 32 => 'Brain',
(int) 33 => 'Heart',
(int) 34 => 'Kidney',
(int) 35 => 'Liver',
(int) 36 => 'Heart',
(int) 37 => 'Liver',
(int) 38 => 'Muscle',
(int) 39 => 'Kidney',
(int) 40 => 'Liver',
(int) 41 => 'Muscle',
(int) 42 => 'Kidney',
(int) 43 => 'Liver',
(int) 44 => 'Heart',
(int) 45 => 'Brain',
(int) 46 => 'Heart',
(int) 47 => 'Kidney',
(int) 48 => 'Brain',
(int) 49 => 'Heart',
(int) 50 => 'Kidney',
(int) 51 => 'Liver',
(int) 52 => 'Muscle',
(int) 53 => 'Brain',
(int) 54 => 'Heart',
(int) 55 => 'Kidney',
(int) 56 => 'Liver',
(int) 57 => 'Muscle',
(int) 58 => 'Heart',
(int) 59 => 'Liver',
(int) 60 => 'Brain',
(int) 61 => 'Heart',
(int) 62 => 'Kidney',
(int) 63 => 'Brain',
(int) 64 => 'Heart',
(int) 65 => 'Kidney',
(int) 66 => 'Muscle',
(int) 67 => 'Brain',
(int) 68 => 'Heart',
(int) 69 => 'Kidney',
(int) 70 => 'Muscle',
(int) 71 => 'Brain',
(int) 72 => 'Brain',
(int) 73 => 'Heart',
(int) 74 => 'Kidney',
(int) 75 => 'Muscle',
(int) 76 => 'Brain',
(int) 77 => 'Heart',
(int) 78 => 'Kidney',
(int) 79 => 'Muscle'
)
)
)
$accession = array(
'region_elements' => array(
'region_element_id' => 'CIL_0007PL_0006',
'tax_id' => '7955',
'chromosome' => '21',
'seq_start' => '38404226',
'seq_end' => '38405181',
'region_length' => '955',
'region_type' => 'UCNEbase',
'el_id' => 'MSI2'
)
)
$gene_el = array(
'ENSDART00000153754' => array(
'Brain' => array(
'average_FPKM' => '0.246',
'stddev_FPKM' => '0.09'
),
'Heart' => array(
'average_FPKM' => '0.730',
'stddev_FPKM' => '0.61'
),
'Kidney' => array(
'average_FPKM' => '2.136',
'stddev_FPKM' => '1.31'
),
'Muscle' => array(
'average_FPKM' => '1.025',
'stddev_FPKM' => '0.00'
)
)
)
$gene_key = 'ENSDARG00000098011'
$is_first = false
$tran_el = array(
'Brain' => array(
'average_FPKM' => '0.246',
'stddev_FPKM' => '0.09'
),
'Heart' => array(
'average_FPKM' => '0.730',
'stddev_FPKM' => '0.61'
),
'Kidney' => array(
'average_FPKM' => '2.136',
'stddev_FPKM' => '1.31'
),
'Muscle' => array(
'average_FPKM' => '1.025',
'stddev_FPKM' => '0.00'
)
)
$tran_key = 'ENSDART00000153754'
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108