C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein S23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000313608 MRPS23-001 ENSG00000181610 9606 - 17:57834781-57850056 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000313608
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000313608 1.843±0.00 2.835±0.00 0.571±0.00 5.437±1.97 2.872±0.00 1.385±0.83 3.221±2.30 3.736±2.84 1.364±0.14 1.047±0.12 1.472±0.71 2.661±1.60 2.175±0.16 3.370±0.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R8 CIL_0007R8_0001 VISTA 17:57241317-57842812
CIL_0007PL CIL_0007PL_0001 UCNEbase 17:57406597-58005077
CIL_0009DM CIL_0009DM_0001 VISTA 17:57461902-58063720
CIL_0009DL CIL_0009DL_0001 VISTA 17:57574410-58175690

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005739 IDA mitochondrion
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0031965 IDA nuclear membrane
GO:0044822 IDA poly(A) RNA binding
GO:0045111 IDA intermediate filament cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183742 MRPS23-201 protein_coding Mus_musculus 0 429
ENSMUST00000024486 Mrps23-001 protein_coding Mus_musculus 0 429
ENSMUST00000139170 Mrps23-003 protein_coding Mus_musculus 0 392
ENSMUST00000118784 Mrps23-002 protein_coding Mus_musculus 0 392
ENSMUST00000144070 Mrps23-004 protein_coding Mus_musculus 0 244

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