C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: autophagy related 9B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000181652 ATG9B 9606 - 7:151012209-151024499 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000404733 ATG9B-012 151013295-151014304 retained_intron
  ENST00000466157 ATG9B-011 151021188-151024494 processed_transcript
  ENST00000469530 ATG9B-007 151015182-151024423 protein_coding
  ENST00000471797 ATG9B-010 151014871-151015996 retained_intron
  ENST00000473134 ATG9B-008 151020918-151023516 retained_intron
  ENST00000473409 ATG9B-005 151019837-151024499 processed_transcript
  ENST00000476282 ATG9B-009 151013854-151015589 processed_transcript
  ENST00000498521 ATG9B-020 151012209-151012785 processed_transcript
  ENST00000605952 ATG9B-001 151012214-151024499 nonsense_mediated_decay
  ENST00000611177 ATG9B-003 151015172-151018801 processed_transcript
  ENST00000617967 ATG9B-002 151013238-151024465 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyLiverPlacentaTestisENST00000404733ENST00000611177
Transcript ID Adipose Adrenal Brain Colon Kidney Liver Placenta Testis
ENST00000404733 25.726±0.00 28.406±0.00 N/A 9.608±0.00 5.929±0.00 5.391±0.00 N/A N/A
ENST00000611177 N/A N/A 0.253±0.00 N/A N/A N/A 3.206±0.00 13.672±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0001 VISTA 7:150668461-151272977
CIL_0004OG CIL_0004OG_0001 CGP 7:150944961-151014588
CIL_0004OH CIL_0004OH_0001 CGP 7:150990995-151024499
CIL_0004O6 CIL_0004O6_0001 CGP 7:151012209-151047782

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000045 IDA autophagic vacuole assembly
GO:0005737 IEA cytoplasm
GO:0005776 IEA autophagic vacuole
GO:0006914 IEA autophagy
GO:0016021 IEA integral component of membrane
GO:0031410 IEA cytoplasmic vesicle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055292 atg9b ATG9 autophagy related 9 homolog B (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000038295 Atg9b autophagy related 9B protein_coding Mus_musculus

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