C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Yip1 domain family, member 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000181704 YIPF6 9606 + X:68498323-68537285 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000374622 YIPF6-201 68498782-68537266 protein_coding
  ENST00000374643 YIPF6-004 68499049-68531970 processed_transcript
  ENST00000451537 YIPF6-003 68498562-68531982 protein_coding
  ENST00000462683 YIPF6-001 68498323-68537285 protein_coding
  ENST00000462972 YIPF6-005 68499081-68513405 processed_transcript
  ENST00000470730 YIPF6-002 68499034-68515340 processed_transcript
  ENST00000496576 YIPF6-006 68511807-68513641 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374622ENST00000374643ENST00000462683
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374622 2.782±0.00 2.255±0.00 1.545±0.00 3.230±0.00 5.444±0.00 4.901±0.00 N/A 4.069±0.83 3.250±0.00 3.448±1.38 3.947±0.00 N/A 2.091±1.40 3.387±0.62
ENST00000374643 N/A N/A N/A N/A N/A N/A N/A N/A 8.216±0.00 N/A N/A N/A N/A N/A
ENST00000462683 2.488±0.00 1.072±0.00 1.233±0.00 1.565±0.15 2.639±0.92 1.200±0.09 1.003±0.33 1.246±0.16 1.089±0.15 1.982±0.58 0.874±0.08 3.296±1.54 1.960±0.51 1.447±0.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SQ CIL_0001SQ_0002 CGP X:68042344-68537285
CIL_0000YH CIL_0000YH_0002 CGP X:68498323-68725842

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IDA endoplasmic reticulum
GO:0005801 IEA cis-Golgi network
GO:0005802 IEA trans-Golgi network
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030134 IEA ER to Golgi transport vesicle
GO:0042802 IEA identical protein binding
GO:0060576 IEA intestinal epithelial cell development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054433 yipf6 Yip1 domain family, member 6 protein_coding Danio_rerio
ENSMUSG00000047694 Yipf6 Yip1 domain family, member 6 protein_coding Mus_musculus

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