C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Yip1 domain family, member 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047694 Yipf6 10090 + X:98936316-98949017 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000054697 Yipf6-001 98937761-98949017 protein_coding
  ENSMUST00000113811 Yipf6-002 98936316-98945131 protein_coding
  ENSMUST00000124010 Yipf6-006 98937301-98939881 protein_coding
  ENSMUST00000140479 Yipf6-004 98938207-98944035 retained_intron
  ENSMUST00000149082 Yipf6-003 98937761-98944906 retained_intron
  ENSMUST00000151353 Yipf6-005 98937273-98943635 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054697ENSMUST00000113811ENSMUST00000149082ENSMUST00000151353
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054697 3.416±1.64 2.967±0.80 6.051±2.61 4.719±1.60 2.814±1.05 4.744±1.38 3.074±0.16 3.278±0.85 2.911±1.40 7.403±2.83 0.608±0.12 1.649±0.58 1.830±0.55 1.583±0.00
ENSMUST00000113811 10.016±1.14 8.217±2.42 N/A N/A 8.913±1.96 19.874±1.94 5.285±1.01 9.512±2.00 8.111±1.45 17.178±1.82 N/A 8.226±1.69 11.763±4.25 9.541±1.39
ENSMUST00000149082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.291±0.00
ENSMUST00000151353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.198±1.55 7.719±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SQ CIL_0001SQ_0003 CGP X:98554277-98949017
CIL_0000YH CIL_0000YH_0003 CGP X:98936316-99074728

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0005801 IDA cis-Golgi network
GO:0005802 IDA trans-Golgi network
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030134 IDA ER to Golgi transport vesicle
GO:0042802 IDA identical protein binding
GO:0060576 IMP intestinal epithelial cell development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054433 yipf6 Yip1 domain family, member 6 protein_coding Danio_rerio
ENSG00000181704 YIPF6 Yip1 domain family, member 6 protein_coding Homo_sapiens

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