C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adhesion molecule with Ig-like domain 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000181754 AMIGO1 9606 - 1:109504175-109509738 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000369862 AMIGO1-002 109507068-109509738 protein_coding
  ENST00000369864 AMIGO1-001 109504175-109509682 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000369862ENST00000369864
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000369862 N/A N/A 0.679±0.00 N/A N/A N/A 0.709±0.00 N/A N/A N/A 0.513±0.00 0.161±0.00 0.289±0.00 N/A
ENST00000369864 1.788±0.00 1.645±0.00 0.320±0.00 5.273±0.50 2.336±1.80 2.149±1.56 2.597±0.00 1.291±0.85 0.933±0.30 0.702±0.00 4.230±2.84 1.383±1.51 0.838±0.07 3.344±0.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098X CIL_00098X_0001 VISTA 1:108953074-109556228
CIL_00099A CIL_00099A_0001 VISTA 1:108974252-109576283

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0007156 ISS homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007157 ISS heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007409 IEA axonogenesis
GO:0007413 ISS axonal fasciculation
GO:0016021 IEA integral component of membrane
GO:0042552 ISS myelination
GO:0042995 IEA cell projection
GO:0050772 ISS positive regulation of axonogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079620 amigo1 adhesion molecule with Ig-like domain 1 protein_coding Danio_rerio
ENSMUSG00000050947 Amigo1 adhesion molecule with Ig like domain 1 protein_coding Mus_musculus

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