C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein S16
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000182180 MRPS16 9606 - 10:73248843-73252693 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372940 MRPS16-005 73248938-73252693 protein_coding
  ENST00000372945 MRPS16-001 73248843-73252693 protein_coding
  ENST00000471251 MRPS16-003 73250741-73252404 processed_transcript
  ENST00000473427 MRPS16-004 73250744-73252634 processed_transcript
  ENST00000479005 MRPS16-002 73248843-73252625 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372945ENST00000473427ENST00000479005
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372945 30.082±0.00 25.077±0.00 N/A 15.814±1.39 17.881±13.03 6.037±0.00 16.646±12.74 13.621±8.05 9.832±2.45 10.357±0.00 20.665±0.00 14.414±7.08 9.209±1.10 13.851±0.00
ENST00000473427 N/A N/A N/A N/A N/A 18.175±0.00 N/A N/A 34.819±0.00 N/A 36.626±0.00 N/A 39.665±8.98 N/A
ENST00000479005 N/A N/A 6.065±0.00 N/A N/A N/A 2.615±0.00 N/A N/A N/A 5.236±0.00 8.016±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IK CIL_0000IK_0001 CGP 10:73168166-73248862
CIL_0000IH CIL_0000IH_0001 CGP 10:73183362-73252693
CIL_0000II CIL_0000II_0001 CGP 10:73248843-73358859

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005739 IEA mitochondrion
GO:0005763 IDA mitochondrial small ribosomal subunit
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091610 mrps16 mitochondrial ribosomal protein S16 protein_coding Danio_rerio
ENSMUSG00000049960 Mrps16 mitochondrial ribosomal protein S16 protein_coding Mus_musculus

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