C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0003X1_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000155592-ENSG00000182601 | CGP | 9606 | 16:25236001-26137688  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000155592  (ZKSCAN2)zinc finger with KRAB and SCAN domains 2 |
ENST00000328086 (ZKSCAN2-001)
|
25236001-25257931 | protein_coding | |
|
ENST00000565590 (ZKSCAN2-003)
|
25246271-25257534 | retained_intron | ||
|
ENST00000569150 (ZKSCAN2-002)
|
25239494-25257557 | nonsense_mediated_decay | ||
|
ENSG00000182601 (HS3ST4) heparan sulfate (glucosamine) 3-O-sulfotransferase 4 |
ENST00000331351 (HS3ST4-001)
|
25692026-26137688 | protein_coding | |
|
ENST00000475436 (HS3ST4-002)
|
25886746-26136207 | processed_transcript | ||
|
ENSG00000230330 (HMGN2P3) high mobility group nucleosomal binding domain 2 pseudogene 3 |
ENST00000433603 (HMGN2P3-001)
|
26032539-26032811 | processed_pseudogene | |
|
ENSG00000237140 (HSPE1P16) heat shock 10kDa protein 1 pseudogene 16 |
ENST00000426640 (HSPE1P16-001)
|
26062750-26063097 | processed_pseudogene | |
|
ENSG00000259955 (CTD-2547G23.2) |
ENST00000569456 (CTD-2547G23.2-001)
|
25238318-25239287 | antisense | |
|
ENSG00000260255 (RP11-185O21.1) |
ENST00000564266 (RP11-185O21.1-001)
|
25824710-25826330 | processed_pseudogene | |
|
ENSG00000260690 (CYCSP39) cytochrome c, somatic pseudogene 39 |
ENST00000565821 (CYCSP39-001)
|
25454339-25454647 | processed_pseudogene | |
|
ENSG00000261636 (CTA-249B10.1) |
ENST00000568036 (CTA-249B10.1-001)
|
25419814-25424169 | lincRNA | |
|
ENSG00000274925 (CTD-2547G23.4) |
ENST00000612792 (CTD-2547G23.4-001)
|
25257952-25261066 | lincRNA | |
| CIL_0003X1_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000030757-ENSMUSG00000078591 | CGP | 10090 | 7:123479516-124398989 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000030757 (Zkscan2) zinc finger with KRAB and SCAN domains 2 |
ENSMUST00000042470 (Zkscan2-001)
|
123479516-123500449 | protein_coding | |
|
ENSMUST00000125356 (Zkscan2-003)
|
123480142-123484977 | protein_coding | ||
|
ENSMUST00000128217 (Zkscan2-002)
|
123494214-123500449 | protein_coding | ||
|
ENSMUSG00000078591 (Hs3st4) heparan sulfate (glucosamine) 3-O-sulfotransferase 4 |
ENSMUST00000106437 (Hs3st4-001)
|
123982869-124398989 | protein_coding | |
|
ENSMUSG00000085899 (Gm15338) predicted gene 15338 |
ENSMUST00000151884 (Gm15338-001)
|
124186718-124290270 | sense_intronic | |
|
ENSMUSG00000098129 (Gm27040) predicted gene, 27040 |
ENSMUST00000181984 (Gm27040-001)
|
123971046-123983454 | antisense | |
|
ENSMUSG00000098160 (Gm26974) predicted gene, 26974 |
ENSMUST00000182054 (Gm26974-002)
|
123966398-123968381 | lincRNA | |
|
ENSMUST00000183263 (Gm26974-001)
|
123958955-123968767 | lincRNA | ||
Expression Patterns
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