C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neugrin, neurite outgrowth associated
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000182768 NGRN 9606 + 15:90265659-90278141 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331497 NGRN-001 90265659-90273231 processed_transcript
  ENST00000379095 NGRN-002 90265705-90278141 protein_coding
  ENST00000411845 NGRN-003 90266343-90275778 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331497ENST00000379095
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331497 27.127±0.00 35.256±0.00 5.887±0.00 89.418±31.75 23.130±14.51 29.268±22.74 14.776±6.86 20.827±14.99 13.052±1.22 30.514±21.26 42.722±19.80 39.429±17.19 21.222±8.78 42.149±9.39
ENST00000379095 1.860±0.00 2.565±0.00 N/A N/A 1.450±0.88 0.905±0.00 N/A 0.987±0.73 0.742±0.05 0.685±0.00 N/A 3.037±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FE CIL_0008FE_0001 VISTA 15:90100149-90701385
CIL_0003GZ CIL_0003GZ_0001 CGP 15:90233808-90272208
CIL_0003H1 CIL_0003H1_0001 CGP 15:90249556-90278141

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0005634 NAS nucleus
GO:0030182 NAS neuron differentiation
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061314 NGRN neugrin, neurite outgrowth associated protein_coding Danio_rerio
ENSMUSG00000047084 Ngrn neugrin, neurite outgrowth associated protein_coding Mus_musculus

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