C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neugrin, neurite outgrowth associated
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000331497 NGRN-001 ENSG00000182768 9606 + 15:90265659-90273231 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331497
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331497 27.127±0.00 35.256±0.00 5.887±0.00 89.418±31.75 23.130±14.51 29.268±22.74 14.776±6.86 20.827±14.99 13.052±1.22 30.514±21.26 42.722±19.80 39.429±17.19 21.222±8.78 42.149±9.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FE CIL_0008FE_0001 VISTA 15:90100149-90701385
CIL_0003GZ CIL_0003GZ_0001 CGP 15:90233808-90272208
CIL_0003H1 CIL_0003H1_0001 CGP 15:90249556-90278141

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000138005 Ngrn-002 retained_intron Mus_musculus 0 745
ENSMUST00000117989 Ngrn-001 protein_coding Mus_musculus 2e-29 135

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