C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neugrin, neurite outgrowth associated
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047084 Ngrn 10090 + 7:80261215-80265374 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000117989 Ngrn-001 80261215-80265374 protein_coding
  ENSMUST00000138005 Ngrn-002 80261220-80265374 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117989ENSMUST00000138005
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117989 5.059±0.79 N/A 10.850±1.48 5.021±1.04 3.542±1.32 5.872±1.05 7.350±0.31 7.403±0.69 8.390±1.13 3.800±0.52 9.227±0.75 9.121±1.36 12.630±4.15 1.539±0.52
ENSMUST00000138005 6.202±1.05 29.748±4.29 12.346±3.62 18.219±7.48 11.846±3.96 7.318±0.84 2.787±0.23 5.214±0.87 6.788±4.37 12.997±1.88 2.487±0.51 14.654±4.47 3.577±1.88 4.107±1.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AY CIL_0008AY_0002 VISTA 7:80145068-80746500
CIL_0003H1 CIL_0003H1_0002 CGP 7:80246376-80265374

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0005634 IDA nucleus
GO:0007399 IEA nervous system development
GO:0008150 ND biological_process
GO:0030154 IEA cell differentiation
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061314 NGRN neugrin, neurite outgrowth associated protein_coding Danio_rerio
ENSG00000182768 NGRN neugrin, neurite outgrowth associated protein_coding Homo_sapiens

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